RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SYNPOQ8N3V7 929 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 EPYCQ99645 322 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 P2RY13Q9BPV8 354 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 DUSP26Q9BV47 211 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 GABARAPL3Q9BY60 117 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 FBXL12Q9NXK8 326 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 PDE4DIPQ5VU43 2346 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 ZW10O43264 779 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 POU1F1P28069 291 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 IRF8Q02556 426 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 SRSF11Q05519 484 aaKnown RBP16.84■□□□□ 0.29
TRAM1-201ENST00000262213 PRKCDQ05655 676 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 GAB1Q13480 694 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 C10orf62Q5T681 223 aaPredicted RBP16.84■□□□□ 0.29
TRAM1-201ENST00000262213 NXNL2Q5VZ03 156 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 RNF165Q6ZSG1 346 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 TSEN54Q7Z6J9 526 aaKnown RBP16.84■□□□□ 0.29
TRAM1-201ENST00000262213 MMAAQ8IVH4 418 aaKnown RBP16.84■□□□□ 0.29
TRAM1-201ENST00000262213 FAM9CQ8IZT9 166 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 LGI4Q8N135 537 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 ASIC4Q96FT7 647 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 SH3BP4Q9P0V3 963 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 CD84Q9UIB8 345 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 PCDHB11Q9Y5F2 797 aa16.84■□□□□ 0.29
TRAM1-201ENST00000262213 NINQ8N4C6 2090 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 CTGFP29279 349 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 SLC11A1P49279 550 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 ACSM2AQ08AH3 577 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 MTAPQ13126 283 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 PLD1Q13393 1074 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 MADCAM1Q13477 382 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 MBTPS1Q14703 1052 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 TAF12Q16514 161 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 BCL7AQ4VC05 210 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 ATP13A5Q4VNC0 1218 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 ACSM2BQ68CK6 577 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 CACTIN-AS1Q8N1I8 211 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 IL17RDQ8NFM7 739 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 CSGALNACT1Q8TDX6 532 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 COL21A1Q96P44 957 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 NEDD4LQ96PU5 975 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 NDUFAF4Q9P032 175 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 BOLA1Q9Y3E2 137 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 PCDHGA3Q9Y5H0 932 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 PEX16Q9Y5Y5 336 aa16.83■□□□□ 0.29
TRAM1-201ENST00000262213 NPIPB15A6NHN6 443 aaPredicted RBP16.83■□□□□ 0.28
TRAM1-201ENST00000262213 EOMESO95936 686 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 EIF2S1P05198 315 aaKnown RBP16.83■□□□□ 0.28
TRAM1-201ENST00000262213 ADRA2AP08913 450 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 HLA-EP13747 358 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 CSNK2BP67870 215 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 XKR6Q5GH73 641 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 LRRC70Q7Z2Q7 622 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 B3GNT7Q8NFL0 401 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 DNAJC11Q9NVH1 559 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 RHCGQ9UBD6 479 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 ZNF221Q9UK13 617 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 SOX6P35712 828 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 B4GALNT1Q00973 533 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 SMARCB1Q12824 385 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 GANABQ14697 944 aaKnown RBP16.83■□□□□ 0.28
TRAM1-201ENST00000262213 COX20Q5RI15 118 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 SERPINA13PQ6UXR4 307 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 ZNF852Q6ZMS4 543 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 C2orf69Q8N8R5 385 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 DOHHQ9BU89 302 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 CNPPD1Q9BV87 410 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 MARCH5Q9NX47 278 aa16.83■□□□□ 0.28
TRAM1-201ENST00000262213 TRBV5-4A0A0C4DH59 114 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 H3BM21 787 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 ETFAP13804 333 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 CD22P20273 847 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 OR1D2P34982 312 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 NSG1P42857 185 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 MRPS15P82914 257 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 CSTF3Q12996 717 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 DOC2BQ14184 412 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 AGAP6Q5VW22 663 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 FAM217AQ8IXS0 508 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 FOXJ1Q92949 421 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 PLD4Q96BZ4 506 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 AGAP4Q96P64 663 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 TCF25Q9BQ70 676 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 MOV10Q9HCE1 1003 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 VPS29Q9UBQ0 182 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 N6AMT1Q9Y5N5 214 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 GABRR3A8MPY1 467 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 TFECO14948 347 aaPredicted RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 AOC2O75106 756 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 GBAP04062 536 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 SLC10A3P09131 477 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 CYBAP13498 195 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 RACK1P63244 317 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 RGNQ15493 299 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 ATAD3CQ5T2N8 411 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 CPTPQ5TA50 214 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 TPGS1Q6ZTW0 290 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 NRARPQ7Z6K4 114 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 OR4K1Q8NGD4 311 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms