RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 NPIPB15A6NHN6 443 aaPredicted RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 F7P08709 466 aaPredicted RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 ENGP17813 658 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 HLA-FP30511 346 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 P2RY2P41231 377 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 PDX1P52945 283 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 WDR4P57081 412 aaKnown RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 OR4D2P58180 307 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 DEFB134Q4QY38 66 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 SLC30A6Q6NXT4 461 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 LIPIQ6XZB0 460 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 DTD2Q96FN9 168 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 SLC39A13Q96H72 371 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 TRAPPC9Q96Q05 1148 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 CGREF1Q99674 301 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 OLFM1Q99784 485 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 KATNBL1Q9H079 304 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 GPRC5BQ9NZH0 403 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.26
CDH1-201ENST00000261769 RENP00797 406 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 GP1BBP13224 206 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 CD1DP15813 335 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 C4BPBP20851 252 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 RPS3P23396 243 aaKnown RBP eCLIP13.46□□□□□ -0.26
CDH1-201ENST00000261769 HOXD9P28356 352 aaPredicted RBP13.46□□□□□ -0.26
CDH1-201ENST00000261769 IRS1P35568 1242 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 OLR1P78380 273 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 COX10Q12887 443 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 MANEALQ5VSG8 457 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 PAQR9Q6ZVX9 377 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 PEG10Q86TG7 708 aaKnown RBP13.46□□□□□ -0.26
CDH1-201ENST00000261769 CLVS1Q8IUQ0 354 aaPredicted RBP13.46□□□□□ -0.26
CDH1-201ENST00000261769 RLN3Q8WXF3 142 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 PRDM4Q9UKN5 801 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 HCN4Q9Y3Q4 1203 aa13.46□□□□□ -0.26
CDH1-201ENST00000261769 LOC100506127A0A0U1RQW1 187 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 ZNF860A6NHJ4 632 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CLEC3AO75596 197 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 RCVRNP35243 200 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 MEF2AQ02078 507 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 ZNF630Q2M218 657 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CATSPEREQ5SY80 951 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 SVOPLQ8N434 492 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 AMER2Q8N7J2 671 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 PHOSPHO1Q8TCT1 267 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 IL17FQ96PD4 163 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 REEP4Q9H6H4 257 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 IL26Q9NPH9 171 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 DKK3Q9UBP4 350 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 TESMINQ9Y4I5 508 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 LINC00854A0A1B0GVQ3 168 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CHST10O43529 356 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 LINGO3P0C6S8 592 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CYP4B1P13584 511 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 ARSDP51689 593 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 ZNF41P51814 821 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 YPEL5P62699 121 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CDK6Q00534 326 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 NR0B2Q15466 257 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 SLC9B1Q4ZJI4 515 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 ARMC4Q5T2S8 1044 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 KIAA0895LQ68EN5 471 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 NEK7Q8TDX7 302 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 C6orf62Q9GZU0 229 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 B3GAT2Q9NPZ5 323 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 EDIL3O43854 480 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 TRIM3O75382 744 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 SERPINA1P01009 418 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 KCNJ5P48544 419 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 XKP51811 444 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 PCDH1Q08174 1060 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 NXPE4Q6UWF7 544 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 IGDCC3Q8IVU1 814 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 SNX33Q8WV41 574 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 PNPLA3Q9NST1 481 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 WBP11Q9Y2W2 641 aaKnown RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 PGRP06401 933 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CD63P08962 238 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 PCYT1AP49585 367 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 SYT16Q17RD7 645 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 TRIM16LQ309B1 348 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 CEACAM20Q6UY09 585 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 LINC00471Q8N535 108 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 KBTBD8Q8NFY9 601 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 PNPLA2Q96AD5 504 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 SLC25A36Q96CQ1 311 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
CDH1-201ENST00000261769 CACNA1SQ13698 1873 aa13.45□□□□□ -0.26
CDH1-201ENST00000261769 C1orf226A1L170 272 aa13.44□□□□□ -0.26
CDH1-201ENST00000261769 ABLIM1O14639 778 aa13.44□□□□□ -0.26
CDH1-201ENST00000261769 CACNG3O60359 315 aa13.44□□□□□ -0.26
CDH1-201ENST00000261769 PGM3O95394 542 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms