RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 YIPF6Q96EC8 236 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 EXOSC4Q9NPD3 245 aaKnown RBP13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 RAD18Q9NS91 495 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TMEM184CQ9NVA4 438 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 DNAJC11Q9NVH1 559 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 IMPAD1Q9NX62 359 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 MYOFQ9NZM1 2061 aa13.98□□□□□ -0.17
SFSWAP-201ENST00000261674 TTC34A8MYJ7 566 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 WBP4O75554 376 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 SERPINA4P29622 427 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 CD40LGP29965 261 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 VEPH1Q14D04 833 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 DGKKQ5KSL6 1271 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 CMTM7Q96FZ5 175 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 SLC29A3Q9BZD2 475 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 OR51E2Q9H255 320 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 COL4A6Q14031 1691 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 MGAT4DA6NG13 374 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 TNFRSF11BO00300 401 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 PRPS1L1P21108 318 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 RPS3P23396 243 aaKnown RBP eCLIP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 AOAHP28039 575 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 S100A5P33763 92 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 RCVRNP35243 200 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 MTA1Q13330 715 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 KCNJ8Q15842 424 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 PLEKHG6Q3KR16 790 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 ZC3H12BQ5HYM0 836 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 NLGN4XQ8N0W4 816 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 NAGSQ8N159 534 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 C1orf52Q8N6N3 182 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 HJURPQ8NCD3 748 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 VMP1Q96GC9 406 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 Q96MT0 163 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 KLF16Q9BXK1 252 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 SLIRPQ9GZT3 109 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 ZNF334Q9HCZ1 680 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 RLIMQ9NVW2 624 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 VPS29Q9UBQ0 182 aa13.97□□□□□ -0.17
SFSWAP-201ENST00000261674 USP34Q70CQ2 3546 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 SNPHO15079 494 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 TGM1P22735 817 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 GABRR2P28476 465 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 TRPC1P48995 793 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 CRISP3P54108 245 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ZNF404Q494X3 552 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 CAPN13Q6MZZ7 669 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 MACC1Q6ZN28 852 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 PTOV1Q86YD1 416 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ARMC8Q8IUR7 673 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 OR5AK3PQ8NH89 298 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 RHOXF1Q8NHV9 184 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 DUSP26Q9BV47 211 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 TTLL2Q9BWV7 592 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 RC3H2Q9HBD1 1191 aaKnown RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 RHCGQ9UBD6 479 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 NDRG4Q9ULP0 352 aaKnown RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 RNF6Q9Y252 685 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 WDR37Q9Y2I8 494 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 CCDC88CQ9P219 2028 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 M0QX08 132 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 PCDH7O60245 1069 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 CYP7B1O75881 506 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 IGSF6O95976 241 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 C8AP07357 584 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ANXA4P09525 319 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 CD70P32970 193 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 B4GALNT1Q00973 533 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 SPIBQ01892 262 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 GANABQ14697 944 aaKnown RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 MED22Q15528 200 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 PSRC1Q6PGN9 363 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 PRSS48Q7RTY5 328 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ADGRD2Q7Z7M1 963 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 SLC5A8Q8N695 610 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 CAPSLQ8WWF8 208 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 TCEAL4Q96EI5 215 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ITPAQ9BY32 194 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ADPRHL2Q9NX46 363 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 ZDHHC3Q9NYG2 299 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 SCHIP1Q9P0W5 487 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 NAALAD2Q9Y3Q0 740 aa13.96□□□□□ -0.17
SFSWAP-201ENST00000261674 MUC3AQ02505 3323 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 RGS5O15539 181 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 BMPR1AP36894 532 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 PRIM2P49643 509 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 PPP5CP53041 499 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 IER5LQ5T953 404 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 CPTPQ5TA50 214 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 EIF3MQ7L2H7 374 aaKnown RBP13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 SLC38A4Q969I6 547 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 CCNB1IP1Q9NPC3 277 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 WDR70Q9NW82 654 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 SPASTQ9UBP0 616 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 ACSL6Q9UKU0 697 aa13.96□□□□□ -0.18
SFSWAP-201ENST00000261674 MAN2B2Q9Y2E5 1009 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms