RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 GABREP78334 506 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 GPR19Q15760 415 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 GRHL2Q6ISB3 625 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 HOMEZQ8IX15 550 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 DNAJC22Q8N4W6 341 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 AIF1LQ9BQI0 150 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 SLC29A3Q9BZD2 475 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 NUF2Q9BZD4 464 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 FGF21Q9NSA1 209 aa19.8■□□□□ 0.76
RTCA-201ENST00000260563 A0A0J9YVX5 310 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 A0A1W2PNU3 283 aaPredicted RBP19.79■□□□□ 0.76
RTCA-201ENST00000260563 TRPC5OSA6NMA1 111 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 TMEM150CB9EJG8 249 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 JUNP05412 331 aaKnown RBP19.79■□□□□ 0.76
RTCA-201ENST00000260563 SPINK2P20155 84 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 CD22P20273 847 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 HNF4AP41235 474 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 ARFIP2P53365 341 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 RAB15P59190 212 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 RPS15AP62244 130 aaKnown RBP19.79■□□□□ 0.76
RTCA-201ENST00000260563 REEP5Q00765 189 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 MC2RQ01718 297 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 MEF2AQ02078 507 aaPredicted RBP19.79■□□□□ 0.76
RTCA-201ENST00000260563 RELAQ04206 551 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 BTKQ06187 659 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 CYP4F3Q08477 520 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 CPSF6Q16630 551 aaKnown RBP eCLIP19.79■□□□□ 0.76
RTCA-201ENST00000260563 TCHHL1Q5QJ38 904 aaPredicted RBP19.79■□□□□ 0.76
RTCA-201ENST00000260563 VWA5B1Q5TIE3 1220 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 TBC1D19Q8N5T2 526 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 OR4K1Q8NGD4 311 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 C10orf82Q8WW14 230 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 PRR11Q96HE9 360 aaPredicted RBP19.79■□□□□ 0.76
RTCA-201ENST00000260563 FCRL4Q96PJ5 515 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 EFCAB11Q9BUY7 163 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 TMEM120AQ9BXJ8 343 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 POLR1BQ9H9Y6 1135 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 FBXO8Q9NRD0 319 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 SLC39A1Q9NY26 324 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 RARRES3Q9UL19 164 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 PLCL2Q9UPR0 1127 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 WASF3Q9UPY6 502 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 NEUROG3Q9Y4Z2 214 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 PCDHGA8Q9Y5G5 932 aa19.79■□□□□ 0.76
RTCA-201ENST00000260563 PMS2P1A4D2B8 440 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 FFAR3O14843 346 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 POLR1CO15160 346 aaPredicted RBP19.78■□□□□ 0.76
RTCA-201ENST00000260563 GPR42O15529 346 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 CXCR2P25025 360 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 ETV5P41161 510 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 GABRA4P48169 554 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 SLBPQ14493 270 aaKnown RBP eCLIP19.78■□□□□ 0.76
RTCA-201ENST00000260563 PAGE2BQ5JRK9 111 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 EPGNQ6UW88 154 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 PLD3Q8IV08 490 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 ZNF501Q96CX3 271 aaPredicted RBP19.78■□□□□ 0.76
RTCA-201ENST00000260563 NRSN2Q9GZP1 204 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 SPNS1Q9H2V7 528 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 IRAK4Q9NWZ3 460 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 PILRAQ9UKJ1 303 aa19.78■□□□□ 0.76
RTCA-201ENST00000260563 FEZF1A0PJY2 475 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 HCRTR1O43613 425 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 KRT6AP02538 564 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 KRT6BP04259 564 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 KRT6CP48668 564 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 CAMK2BQ13554 666 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 LAPTM5Q13571 262 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 IL11RAQ14626 422 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 ZRSR2Q15696 482 aaKnown RBP19.77■□□□□ 0.76
RTCA-201ENST00000260563 CEACAM20Q6UY09 585 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 PPP1R3BQ86XI6 285 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 KRT78Q8N1N4 520 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 OR8K5Q8NH50 307 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 RERGQ96A58 199 aaPredicted RBP19.77■□□□□ 0.76
RTCA-201ENST00000260563 C19orf60Q96EN9 201 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 SEC16BQ96JE7 1060 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 PPP1R36Q96LQ0 422 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 EBF4Q9BQW3 602 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 TUBB1Q9H4B7 451 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 MEAF6Q9HAF1 191 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 APMAPQ9HDC9 416 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 GEMIN8Q9NWZ8 242 aaKnown RBP19.77■□□□□ 0.76
RTCA-201ENST00000260563 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.77■□□□□ 0.76
RTCA-201ENST00000260563 SNX6Q9UNH7 406 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 SPTBP11277 2137 aa19.77■□□□□ 0.76
RTCA-201ENST00000260563 TRBC2A0A5B9 178 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 H0YIV9 168 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 MANBAO00462 879 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 PIP5K1BO14986 540 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 DIAPH2O60879 1101 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 IDH3AP50213 366 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 HTR6P50406 440 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ITGA1P56199 1179 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 HIST2H2ACQ16777 129 aaPredicted RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 SLC9B1Q4ZJI4 515 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 DCAF12Q5T6F0 453 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 HIST2H2AA3Q6FI13 130 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 FRMPD2BQ6IN97 320 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 FBXO42Q6P3S6 717 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 RNF165Q6ZSG1 346 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms