RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 M0QX08 132 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 ITGAMP11215 1152 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CD22P20273 847 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 KCNC4Q03721 635 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 STARD3Q14849 445 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CAPN13Q6MZZ7 669 aaPredicted RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CRTC1Q6UUV9 634 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 TP63Q9H3D4 680 aaPredicted RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 SGK2Q9HBY8 427 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 RPS6KA6Q9UK32 745 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 NDRG4Q9ULP0 352 aaKnown RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 Q9Y3F1 56 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 SCN10AQ9Y5Y9 1956 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 PCDH17O14917 1159 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 RFPL2O75678 378 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 TGFB1P01137 390 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 GALTP07902 379 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 AOAHP28039 575 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 SOX3P41225 446 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CPTPQ5TA50 214 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 OTOP2Q7RTS6 562 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 OLIG3Q7RTU3 272 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 TMPRSS11BQ86T26 416 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 METTL4Q8N3J2 472 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CELF5Q8N6W0 485 aaKnown RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 C7orf57Q8NEG2 295 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 WDR36Q8NI36 951 aaKnown RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 NRTNQ99748 197 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CCM2Q9BSQ5 444 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 NTMT1Q9BV86 223 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 SORBS1Q9BX66 1292 aaKnown RBP12.77□□□□□ -0.37
PGBD1-201ENST00000259883 CEP44Q9C0F1 390 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 BRD9Q9H8M2 597 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 KCTD5Q9NXV2 234 aa12.77□□□□□ -0.37
PGBD1-201ENST00000259883 GABRR3A8MPY1 467 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 LRRTM2O43300 516 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 C9P02748 559 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 FHP07954 510 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 PTNP21246 168 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 LHCGRP22888 699 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 TSPYL5Q86VY4 417 aaPredicted RBP12.76□□□□□ -0.37
PGBD1-201ENST00000259883 TAGAPQ8N103 731 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 CYP4Z2PQ8N1L4 340 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 VMP1Q96GC9 406 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 DNAJC11Q9NVH1 559 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 ANKMY1Q9P2S6 941 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 LOC110117498-PIK3R3F6TDL0 507 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 DSCR3O14972 297 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 ALOX5P09917 674 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 HLA-EP13747 358 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 ACLYP53396 1101 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 UBE3AQ05086 875 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 PPIGQ13427 754 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■□□□ 14.2
PGBD1-201ENST00000259883 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 DEPDC1Q5TB30 811 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 MAGIXQ9H6Y5 334 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 TIGARQ9NQ88 270 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 ADPRHL2Q9NX46 363 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 DNAJC27Q9NZQ0 273 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 C5AR2Q9P296 337 aa12.76□□□□□ -0.37
PGBD1-201ENST00000259883 KIAA0513O60268 411 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 C6orf47O95873 294 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 GRK3P35626 688 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 CSNK1DP48730 415 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 ATN1P54259 1190 aaPredicted RBP12.75□□□□□ -0.37
PGBD1-201ENST00000259883 RAB15P59190 212 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 RACK1P63244 317 aaKnown RBP12.75□□□□□ -0.37
PGBD1-201ENST00000259883 DOC2AQ14183 400 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 SPANXN2Q5MJ10 180 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 RETSATQ6NUM9 610 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 Q6ZVU0 165 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 AMER2Q8N7J2 671 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 CHST14Q8NCH0 376 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 PDLIM5Q96HC4 596 aaKnown RBP12.75□□□□□ -0.37
PGBD1-201ENST00000259883 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.75□□□□□ -0.37
PGBD1-201ENST00000259883 OR51B5Q9H339 312 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 SNTG1Q9NSN8 517 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 ABCB8Q9NUT2 735 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 VPS29Q9UBQ0 182 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 GON4LQ3T8J9 2241 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 RANBP2P49792 3224 aaKnown RBP12.75□□□□□ -0.37
PGBD1-201ENST00000259883 EOMESO95936 686 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 STATHP02808 62 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 CSF2P04141 144 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 KRT8P05787 483 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 ZDHHC11BP0C7U3 371 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 PRPS2P11908 318 aa12.75□□□□□ -0.37
PGBD1-201ENST00000259883 HMGA1P17096 107 aaKnown RBP12.75□□□□□ -0.37
PGBD1-201ENST00000259883 SSTR4P31391 388 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms