RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 HMGN1P05114 100 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PGRP06401 933 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ATP1B2P14415 290 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 KCNE1P15382 129 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 EPCAMP16422 314 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RAD52P43351 418 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PXNP49023 591 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 CASP4P49662 377 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPR143P51810 404 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DAOAP59103 153 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HERV-K104P61576 105 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HOXA4Q00056 320 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 IL5RAQ01344 420 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CLCQ05315 142 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TRAP1Q12931 704 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 ARFRP1Q13795 201 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DPYSL2Q16555 572 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 QPCTQ16769 361 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TEX44Q53QW1 395 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FAM133BQ5BKY9 247 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 SLC35F1Q5T1Q4 408 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PDZK1Q5T2W1 519 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DNAJC14Q6Y2X3 702 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 SSX8Q7RTT4 187 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TMCO2Q7Z6W1 182 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 TRIM74Q86UV6 250 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TRIM73Q86UV7 250 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPR65Q8IYL9 337 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RNF175Q8N4F7 328 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ZNF808Q8N4W9 903 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 LINC00471Q8N535 108 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ZNF283Q8N7M2 679 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 IL17RDQ8NFM7 739 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DNAJB8Q8NHS0 232 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ZCCHC14Q8WYQ9 949 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 PMM1Q92871 262 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MRPL45Q9BRJ2 306 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 ORAI3Q9BRQ5 295 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CHCHD6Q9BRQ6 235 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 OR10A4Q9H209 315 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 OCEL1Q9H607 264 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GOLGA2P5Q9HBQ8 144 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PDLIM7Q9NR12 457 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PAQR5Q9NXK6 330 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 KLHL13Q9P2N7 655 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MARCOQ9UEW3 520 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 MAP4K5Q9Y4K4 846 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HCFC2Q9Y5Z7 792 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ANKRD61A6NGH8 418 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 STMND1H3BQB6 276 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 SCRG1O75711 98 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 INMTO95050 263 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 RCBTB2O95199 551 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 CSF2P04141 144 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 IFNW1P05000 195 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 C8BP07358 591 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 C1SP09871 688 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 ZCCHC18P0CG32 403 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 RAC2P15153 192 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 TAL1P17542 331 aaPredicted RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 GSTM2P28161 218 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 RAB10P61026 200 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 GABREP78334 506 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 FASTKQ14296 549 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 RFX4Q33E94 735 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 PPP1R26Q5T8A7 1209 aaPredicted RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 NRROSQ86YC3 692 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 CHERPQ8IWX8 916 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 TIGD4Q8IY51 512 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 TRAM1L1Q8N609 369 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 ZNF709Q8N972 641 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 RCBTB1Q8NDN9 531 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 AP3S1Q92572 193 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 PSMG2Q969U7 264 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 GNRHR2Q96P88 292 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 NEDD4LQ96PU5 975 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 DHX33Q9H6R0 707 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 LRTM1Q9HBL6 345 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 ZCCHC3Q9NUD5 404 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 PAK1IP1Q9NWT1 392 aaPredicted RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 ZNF223Q9UK11 482 aaPredicted RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 SNX13Q9Y5W8 968 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 WDR27A2RRH5 827 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 HCRTR2O43614 444 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 BUD23O43709 281 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 ZBTB11O95625 1053 aaPredicted RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 ANGPTL1O95841 491 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 ITGA5P08648 1049 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 PSMB4P28070 264 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 MAP3K8P41279 467 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 SLC19A1P41440 591 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 VIPR2P41587 438 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 ERVK-16P61578 105 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 DCDP81605 110 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 TOP3AQ13472 1001 aaPredicted RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 KEAP1Q14145 624 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 NR1I3Q14994 352 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 C9orf152Q5JTZ5 239 aa3.91□□□□□ -1.78
RNF38-201ENST00000259605 RNASEH2BQ5TBB1 312 aaKnown RBP3.91□□□□□ -1.78
RNF38-201ENST00000259605 C1orf189Q5VU69 101 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms