RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 KRT8P05787 483 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 PRPH2P23942 346 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 TNFSF8P32971 234 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 HNF1BP35680 557 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 GPR50Q13585 617 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 CLPPQ16740 277 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-201ENST00000254810 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-201ENST00000254810 CEP44Q9C0F1 390 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 ATG10Q9H0Y0 220 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 RAPGEFL1Q9UHV5 662 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 PCDHGB3Q9Y5G1 929 aa12.93□□□□□ -0.34
H3F3B-201ENST00000254810 A0A1B0GVM2 712 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 PDZK1P1A8MUH7 402 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 LOC110117498-PIK3R3F6TDL0 507 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ARHGAP33O14559 1287 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ADAM12O43184 909 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 SUV39H1O43463 412 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 KRT75O95678 551 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 PAX3P23760 479 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 SLC15A1P46059 708 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 GATMP50440 423 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 CDH12P55289 794 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 CSNK2BP67870 215 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 BOP1Q14137 746 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 BAK1Q16611 211 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 SPANXN2Q5MJ10 180 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 COX20Q5RI15 118 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 UBE2R2Q712K3 238 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 OR8H2Q8N162 312 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 GPR26Q8NDV2 337 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 POP5Q969H6 163 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 TRMT61AQ96FX7 289 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 MTERF1Q99551 399 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 RNF38Q9H0F5 515 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 DDX28Q9NUL7 540 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 GPATCH2Q9NW75 528 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 GLYATL1P3A0A0U1RQE8 302 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 C1orf226A1L170 272 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ETHE1O95571 254 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ABCB1P08183 1280 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 AKR1A1P14550 325 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ITGALP20701 1170 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 PRPS1L1P21108 318 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 AZGP1P25311 298 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 PXNP49023 591 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 DDX39BQ13838 428 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 MED22Q15528 200 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 Q5BKY6 102 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 FRG2Q64ET8 278 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ERICH5Q6P6B1 374 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ANKS3Q6ZW76 656 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 TAS1R1Q7RTX1 841 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 ZNF605Q86T29 641 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 VANGL1Q8TAA9 524 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 FRG2BQ96QU4 278 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 COPS8Q99627 209 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 TTYH2Q9BSA4 534 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 PADI2Q9Y2J8 665 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 WBP11Q9Y2W2 641 aaKnown RBP12.92□□□□□ -0.34
H3F3B-201ENST00000254810 PCDHB11Q9Y5F2 797 aa12.92□□□□□ -0.34
H3F3B-201ENST00000254810 NT5C1B-RDH14C9J2C7 533 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 TMEM189-UBE2V1I3L0A0 370 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 CAPN5O15484 640 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 DUSP11O75319 330 aaKnown RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SNX4O95219 450 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 C1SP09871 688 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SLC6A12P48065 614 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 IRF5Q13568 498 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 C19orf48Q6RUI8 117 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 LGI4Q8N135 537 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 NXPE1Q8N323 547 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 L3MBTL4Q8NA19 623 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 GPR151Q8TDV0 419 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SPATA17Q96L03 361 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 P2RY13Q9BPV8 354 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SLC30A2Q9BRI3 323 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 DOHHQ9BU89 302 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 MKLN1Q9UL63 735 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 ALPK3Q96L96 1907 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 FAM227AF5H4B4 570 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 PCDH17O14917 1159 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 ARHGEF15O94989 841 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SPIBQ01892 262 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 HSPA14Q0VDF9 509 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 SLAMF1Q13291 335 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 VEZF1Q14119 521 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 GGTA1PQ4G0N0 100 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 C9orf131Q5VYM1 1079 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 TMC5Q6UXY8 1006 aa12.91□□□□□ -0.34
H3F3B-201ENST00000254810 WDR53Q7Z5U6 358 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 TMEM173Q86WV6 379 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-201ENST00000254810 GTPBP3Q969Y2 492 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms