RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PCDH7O60245 1069 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 GBAP04062 536 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 NTRK1P04629 796 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 ADH5P11766 374 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 EPHA2P29317 976 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 HOXA9P31269 272 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 BMPR1AP36894 532 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 VASPP50552 380 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 ARHGDIAP52565 204 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.81■□□□□ 0.62e-8■□□□□ 9.9
CDC42EP1-201ENST00000249014 CAPN13Q6MZZ7 669 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 HORMAD1Q86X24 394 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 RAB2BQ8WUD1 216 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF566Q969W8 418 aa18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 SAMHD1Q9Y3Z3 626 aaKnown RBP18.81■□□□□ 0.6
CDC42EP1-201ENST00000249014 SOBPA7XYQ1 873 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 TMEM229AB2RXF0 380 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 PRRT4C9JH25 899 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 UGT2B11O75310 529 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 INMTO95050 263 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 CCDC159P0C7I6 412 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 HLA-EP13747 358 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF8P17098 575 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 AQP1P29972 269 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 FMO3P31513 532 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 HPCAL1P37235 193 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 MAPK9P45984 424 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZBTB46Q86UZ6 589 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 TRAPPC5Q8IUR0 188 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 NAGSQ8N159 534 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 VPS37AQ8NEZ2 397 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 FAM81AQ8TBF8 368 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 RSPRY1Q96DX4 576 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 EPHX3Q9H6B9 360 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 GPN2Q9H9Y4 310 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 SIRT5Q9NXA8 310 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 BAG5Q9UL15 447 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 CDH23Q9H251 3354 aa18.8■□□□□ 0.6
CDC42EP1-201ENST00000249014 SLC9A3R1O14745 358 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 GCM2O75603 506 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ANGPTL1O95841 491 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ABCB1P08183 1280 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 INHBBP09529 407 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 FSHRP23945 695 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 HTR1BP28222 390 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ITGA1P56199 1179 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ST8SIA6P61647 398 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 KCNJ10P78508 379 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 SLBPQ14493 270 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 STARD3Q14849 445 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ANKDD1AQ495B1 522 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 BCL7AQ4VC05 210 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 GALNT18Q6P9A2 607 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ARMCX6Q7L4S7 300 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 PIWIL3Q7Z3Z3 882 aaKnown RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 B3GNT8Q7Z7M8 397 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 FBXO15Q8NCQ5 510 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 OR4K1Q8NGD4 311 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ARRDC3Q96B67 414 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 C7orf34Q96L11 122 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 FUNDC2Q9BWH2 189 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 SPNS1Q9H2V7 528 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 GPATCH2Q9NW75 528 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 SNX5Q9Y5X3 404 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 M0QX08 132 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 SAP18O00422 153 aaKnown RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 AXIN1O15169 862 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 XYLBO75191 536 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 CASP9P55211 416 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 GP2P55259 537 aaKnown RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 MEF2AQ02078 507 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 CAMK1Q14012 370 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 KEAP1Q14145 624 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ANXA8L1Q5VT79 327 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF852Q6ZMS4 543 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 SLC16A12Q6ZSM3 486 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF547Q8IVP9 402 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 OR4A15Q8NGL6 344 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 ASPSCR1Q9BZE9 553 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 CCDC90BQ9GZT6 254 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 THUMPD1Q9NXG2 353 aaKnown RBP18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 GALNT8Q9NY28 637 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 PSME2Q9UL46 239 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 GMEB1Q9Y692 573 aa18.79■□□□□ 0.6
CDC42EP1-201ENST00000249014 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 KLHL33A6NCF5 533 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 RNASET2O00584 256 aaKnown RBP18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 JRKO75564 520 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 ITIH1P19827 911 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 NR4A1P22736 598 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 MVDP53602 400 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 EMX1Q04741 257 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 RTL10Q7L3V2 364 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 COMMD6Q7Z4G1 85 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 CROCCP3Q8IVE0 287 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 LRRC56Q8IYG6 542 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 TTC29Q8NA56 475 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 SETD9Q8NE22 299 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 WDR34Q96EX3 536 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms