RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ARGFXA6NJG6 315 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 SUPT3HB4E1H0 165 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 SUPT3HO75486 399 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 UMODP07911 640 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 FAM153BP0C7A2 387 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 COL6A2P12110 1019 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 GSTM2P28161 218 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 KCNC1P48547 511 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 HSPA7P48741 367 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 IRF9Q00978 393 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 RGS1Q08116 209 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 C18orf21Q32NC0 220 aaPredicted RBP23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 FAM153CQ494X1 144 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 FAM69BQ5VUD6 431 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 LRRC70Q7Z2Q7 622 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 TRPV3Q8NET8 790 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 TTLQ8NG68 377 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 STT3BQ8TCJ2 826 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 EXT2Q93063 718 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 CD244Q9BZW8 370 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 CTSFQ9UBX1 484 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 SLC22A7Q9Y694 548 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 NUP210LQ5VU65 1888 aa23.13■■□□□ 1.29
SDF2L1-201ENST00000248958 A0A0A6YYC8 382 aaPredicted RBP23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 URADA6NGE7 173 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 I3L1I5 382 aaPredicted RBP23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 PRB1P04280 392 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 SNRPAP09012 282 aaKnown RBP23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 ZGLP1P0C6A0 271 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 MMP11P24347 488 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 GMPRP36959 345 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 SKP1P63208 163 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 PDK4Q16654 411 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 TSNAXIP1Q2TAA8 658 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 ADGRD1Q6QNK2 874 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 SLCO4C1Q6ZQN7 724 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 MRGPREQ86SM8 312 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 KRT78Q8N1N4 520 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 DTWD1Q8N5C7 304 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 C9orf43Q8TAL5 461 aaPredicted RBP23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 NT5CQ8TCD5 201 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 UBTD2Q8WUN7 234 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 MTBPQ96DY7 904 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 ABHD17AQ96GS6 310 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 SEC16BQ96JE7 1060 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 CCDC77Q9BR77 488 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 TGIF2Q9GZN2 237 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 NT5DC2Q9H857 520 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 ANKHQ9HCJ1 492 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 COPG2Q9UBF2 871 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 TRPC4Q9UBN4 977 aa23.12■■□□□ 1.29
SDF2L1-201ENST00000248958 UBXN8O00124 270 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 NDUFS4O43181 175 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 CCNT2O60583 730 aaKnown RBP23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 ATP1A4Q13733 1029 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 SLC29A2Q14542 456 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 HERC3Q15034 1050 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 RBBP5Q15291 538 aaKnown RBP23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 ZNF843Q8N446 348 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 AMER3Q8N944 861 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 SNX31Q8N9S9 440 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 KCT2Q8NC54 265 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 ZNF740Q8NDX6 193 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 YIPF2Q9BWQ6 316 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 SPNS1Q9H2V7 528 aa23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 SOX17Q9H6I2 414 aaPredicted RBP23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 G3BP2Q9UN86 482 aaKnown RBP23.11■■□□□ 1.29
SDF2L1-201ENST00000248958 TRIM49D1C9J1S8 452 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 MAP2K7O14733 419 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 PCDH17O14917 1159 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 C1QL1O75973 258 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 STATHP02808 62 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 RBP1P09455 135 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 GLRBP48167 497 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 LAPTM5Q13571 262 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 PPP1R32Q7Z5V6 425 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 ESAMQ96AP7 390 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 PTCD3Q96EY7 689 aaKnown RBP23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 GPR78Q96P69 363 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 MACROD1Q9BQ69 325 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 CRB3Q9BUF7 120 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 P4HTMQ9NXG6 502 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 OPTCQ9UBM4 332 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 TMCO1Q9UM00 188 aa23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 MRPS2Q9Y399 296 aaKnown RBP23.1■■□□□ 1.29
SDF2L1-201ENST00000248958 IQANK1A0A1B0GTG1 560 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 ESPNB1AK53 854 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 K7EPI3 171 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 AGPSO00116 658 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 KLHL41O60662 606 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 SERPIND1P05546 499 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 MTHFD2P13995 350 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 VARSP26640 1264 aaKnown RBP23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 KLC1Q07866 573 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 SLBPQ14493 270 aaKnown RBP eCLIP23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 VWA2Q5GFL6 755 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 PAGE2BQ5JRK9 111 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 TCTN3Q6NUS6 607 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 TMIGD1Q6UXZ0 262 aa23.09■■□□□ 1.29
SDF2L1-201ENST00000248958 TIFABQ6ZNK6 161 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms