RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ASF1AQ9Y294 204 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 QSOX1O00391 747 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 KCNK5O95279 499 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 OPN1SWP03999 348 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 PCCBP05166 539 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 RETP07949 1114 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 GSTT2P0CG29 244 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 GSTT2BP0CG30 244 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 NPPBP16860 134 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 PRPH2P23942 346 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 HNF4AP41235 474 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 CYP4F2P78329 520 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 SIM2Q14190 667 aaPredicted RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 RAB39AQ14964 217 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 CCNYL2Q5T2Q4 361 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 CAPN13Q6MZZ7 669 aaPredicted RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF852Q6ZMS4 543 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 CEP68Q76N32 757 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 ETFBKMTQ8IXQ9 262 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 MMP21Q8N119 569 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 WDR48Q8TAF3 677 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 KLK6Q92876 244 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 FAM129BQ96TA1 746 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 OSBPL10Q9BXB5 764 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 CXorf21Q9HAI6 301 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 RAD18Q9NS91 495 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 PLXNA2O75051 1894 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 PTGES3LE9PB15 166 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 SCAMP2O15127 329 aaKnown RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 C7P10643 843 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 HOXA9P31269 272 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 RELAQ04206 551 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 SRSF11Q05519 484 aaKnown RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 TCEA2Q15560 299 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF385BQ569K4 471 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 MED27Q6P2C8 311 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 C8orf59Q8N0T1 100 aaPredicted RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 LEMD2Q8NC56 503 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 OR5AR1Q8NGP9 310 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 OR5AK3PQ8NH89 298 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 CIDECQ96AQ7 238 aaPredicted RBP15.18■□□□□ 0.02
LRFN1-201ENST00000248668 LRIG1Q96JA1 1093 aa15.18■□□□□ 0.02
LRFN1-201ENST00000248668 LRRK1Q38SD2 2015 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 TRPM6Q9BX84 2022 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 H0YIV9 168 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 ADAM23O75077 832 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 SERPINB7O75635 380 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 TNFRSF1BP20333 461 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 IL12RB1P42701 662 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 GSSP48637 474 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 VLDLRP98155 873 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 MTAPQ13126 283 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 KCNC3Q14003 757 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 COL9A2Q14055 689 aaPredicted RBP15.17■□□□□ 0.02
LRFN1-201ENST00000248668 VMACQ2NL98 169 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 CYP27C1Q4G0S4 372 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 UTS2BQ765I0 119 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 R3HCC1LQ7Z5L2 792 aaKnown RBP15.17■□□□□ 0.02
LRFN1-201ENST00000248668 PTOV1Q86YD1 416 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 RASGRP3Q8IV61 690 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 ZZZ3Q8IYH5 903 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 FAM9CQ8IZT9 166 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 ZCCHC7Q8N3Z6 543 aaKnown RBP15.17■□□□□ 0.02
LRFN1-201ENST00000248668 C12orf43Q96C57 262 aaKnown RBP15.17■□□□□ 0.02
LRFN1-201ENST00000248668 ISOC1Q96CN7 298 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 FZD4Q9ULV1 537 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 DYRK1BQ9Y463 629 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 LATO43561 262 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 MAN1A2O60476 641 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 ITGB7P26010 798 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 CDK9P50750 372 aaKnown RBP15.17■□□□□ 0.02
LRFN1-201ENST00000248668 PPP2R2BQ00005 443 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 GAB4Q2WGN9 574 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 Q6ZNX1 250 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 THAP5Q7Z6K1 395 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 SIX5Q8N196 739 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 ZNF555Q8NEP9 628 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 WFIKKN2Q8TEU8 576 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 RIBC2Q9H4K1 309 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 FANCEQ9HB96 536 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 SPASTQ9UBP0 616 aa15.17■□□□□ 0.02
LRFN1-201ENST00000248668 HOXC11O43248 304 aaPredicted RBP15.16■□□□□ 0.02
LRFN1-201ENST00000248668 LILRB5O75023 590 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 ACPPP15309 386 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 NR4A1P22736 598 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 CTU2Q2VPK5 515 aaKnown RBP15.16■□□□□ 0.02
LRFN1-201ENST00000248668 PSRC1Q6PGN9 363 aaPredicted RBP15.16■□□□□ 0.02
LRFN1-201ENST00000248668 GALNT13Q8IUC8 556 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 OR4A15Q8NGL6 344 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 HSH2DQ96JZ2 352 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 LGR4Q9BXB1 951 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 C8orf4Q9NR00 106 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 CRATP43155 626 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 TAP2Q03519 686 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 CNTN1Q12860 1018 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 GPM6BQ13491 265 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 ATP1A4Q13733 1029 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 ELAVL3Q14576 367 aaKnown RBP15.16■□□□□ 0.02
LRFN1-201ENST00000248668 BORAQ6PGQ7 559 aa15.16■□□□□ 0.02
LRFN1-201ENST00000248668 COMMD6Q7Z4G1 85 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms