RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MAT2AP31153 395 aaKnown RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 TXNL4AP83876 142 aaKnown RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 RBBP5Q15291 538 aaKnown RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 DENND6BQ8NEG7 585 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 PHF12Q96QT6 1004 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 MAGIXQ9H6Y5 334 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 MYNNQ9NPC7 610 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 DCAF13Q9NV06 445 aaKnown RBP22.35■■□□□ 1.17
MSX2-201ENST00000239243 OLAHQ9NV23 265 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 MOSPD1Q9UJG1 213 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 SUFUQ9UMX1 484 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 WDR37Q9Y2I8 494 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 PCDHB11Q9Y5F2 797 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 ATG2BQ96BY7 2078 aa22.35■■□□□ 1.17
MSX2-201ENST00000239243 ARHGAP10A1A4S6 786 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 ANKDD1BA6NHY2 528 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 RNASET2O00584 256 aaKnown RBP22.34■■□□□ 1.17
MSX2-201ENST00000239243 TNFAIP8O95379 198 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 CPSF4O95639 269 aaKnown RBP22.34■■□□□ 1.17
MSX2-201ENST00000239243 GPX2P18283 190 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 CHERPQ8IWX8 916 aaKnown RBP22.34■■□□□ 1.17
MSX2-201ENST00000239243 ZNF740Q8NDX6 193 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.34■■□□□ 1.17
MSX2-201ENST00000239243 MTERF3Q96E29 417 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 SCARF2Q96GP6 870 aaPredicted RBP22.34■■□□□ 1.17
MSX2-201ENST00000239243 SPATA9Q9BWV2 254 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 NT5DC2Q9H857 520 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 UBAP1Q9NZ09 502 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 CD207Q9UJ71 328 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 KCNK6Q9Y257 313 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 MTCH2Q9Y6C9 303 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 DOCK9Q9BZ29 2069 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 SEMA3DO95025 777 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 FAM58BPP0C7Q3 252 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 ENGP17813 658 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 EOGTQ5NDL2 527 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 IKBIPQ70UQ0 350 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 FBXO30Q8TB52 745 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 IMP3Q9NV31 184 aaKnown RBP22.34■■□□□ 1.17
MSX2-201ENST00000239243 SH3BP4Q9P0V3 963 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 BTBD3Q9Y2F9 522 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 GPSM3Q9Y4H4 160 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 GMEB1Q9Y692 573 aa22.34■■□□□ 1.17
MSX2-201ENST00000239243 PRR19A6NJB7 356 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 SLC31A1O15431 190 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 RAB28P51157 221 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 KIAA1024LP59773 190 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 KRT33BQ14525 404 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 NHSL2Q5HYW2 709 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 ANKRD26P1Q6NSI1 321 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 DUS1LQ6P1R4 473 aaKnown RBP22.33■■□□□ 1.17
MSX2-201ENST00000239243 CLECL1Q8IZS7 167 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 EID3Q8N140 333 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 SLC47A1Q96FL8 570 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 VPS50Q96JG6 964 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 CAMK1GQ96NX5 476 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 MVB12BQ9H7P6 319 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 ZNF639Q9UID6 485 aa22.33■■□□□ 1.17
MSX2-201ENST00000239243 ACOX3O15254 700 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 KDM1AO60341 852 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 CCNDBP1O95273 360 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 FBXO43Q4G163 708 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 MRGPRX1Q96LB2 322 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 CXorf56Q9H5V9 222 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 FZD3Q9NPG1 666 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 ZNF282Q9UDV7 671 aaPredicted RBP22.33■■□□□ 1.16
MSX2-201ENST00000239243 VPS4AQ9UN37 437 aa22.33■■□□□ 1.16
MSX2-201ENST00000239243 PDLIM1O00151 329 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 PRSS23O95084 383 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 PPP2CBP62714 309 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 PPP2CAP67775 309 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 REEP5Q00765 189 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 PDE7AQ13946 482 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 MLF2Q15773 248 aaPredicted RBP22.32■■□□□ 1.16
MSX2-201ENST00000239243 UAP1L1Q3KQV9 507 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 VN1R5Q7Z5H4 357 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 OR4K1Q8NGD4 311 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 C16orf78Q8WTQ4 265 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 ABHD8Q96I13 439 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 ANKRD60Q9BZ19 345 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 AASDHPPTQ9NRN7 309 aa22.32■■□□□ 1.16
MSX2-201ENST00000239243 A0A1W2PPV9 198 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 PDZK1P1A8MUH7 402 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 SAP18O00422 153 aaKnown RBP22.31■■□□□ 1.16
MSX2-201ENST00000239243 ZNF23P17027 643 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 CPZQ66K79 652 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 ENPP6Q6UWR7 440 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 CARM1Q86X55 608 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 C10orf111Q8N326 155 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 PGBD3Q8N328 593 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 TPT1P8Q9HAU6 139 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 SAMD4AQ9UPU9 718 aaKnown RBP22.31■■□□□ 1.16
MSX2-201ENST00000239243 WBP11Q9Y2W2 641 aaKnown RBP22.31■■□□□ 1.16
MSX2-201ENST00000239243 HEBP2Q9Y5Z4 205 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 F5P12259 2224 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 MT-ND1P03886 318 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 GPR155Q7Z3F1 870 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 SLC9B2Q86UD5 537 aa22.31■■□□□ 1.16
MSX2-201ENST00000239243 FAM124AQ86V42 546 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms