RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GPR150Q8NGU9 434 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 GPR151Q8TDV0 419 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 HSH2DQ96JZ2 352 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 TMEM248Q9NWD8 314 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 ELOVL2Q9NXB9 296 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 CLDN24A6NM45 220 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 M0R082 166 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 PRAMEF12O95522 483 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 ALPIP09923 528 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 HOXA9P31269 272 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC19A1P41440 591 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 OR1E2P47887 323 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 RFX2P48378 723 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 TGM4P49221 684 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 NFE2L1Q14494 772 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 FAM171BQ6P995 826 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 ENTHD1Q8IYW4 607 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 POPDC3Q9HBV1 291 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 IL1RAPQ9NPH3 570 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 MALT1Q9UDY8 824 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 NAALAD2Q9Y3Q0 740 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 SNX4O95219 450 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 IL6P05231 212 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 TTPAP49638 278 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 RPS14P62263 151 aaKnown RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 HOXC5Q00444 222 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF551Q7Z340 670 aaPredicted RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 TESCQ96BS2 214 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 RNF170Q96K19 258 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 SEPT5Q99719 369 aaPredicted RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF556Q9HAH1 456 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 TLR6Q9Y2C9 796 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 A0A1W2PRG6 482 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 H3BM21 787 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC25A14O95258 325 aaPredicted RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 NUDT7P0C024 238 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF140P52738 457 aaPredicted RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 UGT2B15P54855 530 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 NKX3-2P78367 333 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 KIAA0040Q15053 153 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 USP39Q53GS9 565 aaKnown RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 GPR142Q7Z601 462 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 OR4M1Q8NGD0 313 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 VANGL1Q8TAA9 524 aaPredicted RBP13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF675Q8TD23 568 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 RAI2Q9Y5P3 530 aa13.69□□□□□ -0.22
PCDHB3-201ENST00000231130 F2P00734 622 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 PTHP01270 115 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 ENGP17813 658 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 DNAJA1P31689 397 aaKnown RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 GZMKP49863 264 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 ARMC12Q5T9G4 340 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 PLCZ1Q86YW0 608 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 KCNJ13O60928 360 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 TSPAN19P0C672 248 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 ITGALP20701 1170 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 CD52P31358 61 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 PRIM2P49643 509 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 TAF10Q12962 218 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 TYW3Q6IPR3 259 aaKnown RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 LKAAEAR1Q8TD35 194 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 MAGEB10Q96LZ2 347 aaPredicted RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 TM6SF2Q9BZW4 377 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 SAV1Q9H4B6 383 aaPredicted RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 IMPAD1Q9NX62 359 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 SAMD4AQ9UPU9 718 aaKnown RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 RETP07949 1114 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 IRF1P10914 325 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 ABATP80404 500 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 ACVR1Q04771 509 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 GPR68Q15743 365 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 UAP1L1Q3KQV9 507 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 KDM4DQ6B0I6 523 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 SBSNQ6UWP8 590 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 SNX20Q7Z614 316 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 COMMD7Q86VX2 200 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 CLECL1Q8IZS7 167 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 OR6C4Q8NGE1 309 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 SPATA9Q9BWV2 254 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 RNF121Q9H920 327 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC6A14Q9UN76 642 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
PCDHB3-201ENST00000231130 CLIC1O00299 241 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 IFRD1O00458 451 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TNFRSF10BO14763 440 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TAPBPO15533 448 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 IFNA16P05015 189 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 ATF6P18850 670 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 ST3GAL4Q11206 333 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 EIF4EBP2Q13542 120 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TATDN3Q17R31 274 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms