RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SLC35E2BP0CK96 405 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 CCKBRP32239 447 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 NRIP1P48552 1158 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 DNASE1L1P49184 302 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 BTN3A2P78410 334 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 E2F2Q14209 437 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 PPP1R3AQ16821 1122 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 TECRLQ5HYJ1 363 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ZNF554Q86TJ5 538 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 RHEBL1Q8TAI7 183 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 RELTQ969Z4 430 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ZSWIM3Q96MP5 696 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 POFUT2Q9Y2G5 429 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 MED31Q9Y3C7 131 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 B4DGG1 531 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 LEFTY1O75610 366 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 PAK4O96013 591 aaPredicted RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 GNALP38405 381 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 STARP49675 285 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 STK19P49842 368 aaPredicted RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 ZNF630Q2M218 657 aaPredicted RBP11.16□□□□□ -0.62
NOD1-201ENST00000222823 ZFP69Q49AA0 526 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 LCN1P1Q5VSP4 162 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 CLIP4Q8N3C7 705 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 RETREG1Q9H6L5 497 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 ANKRD12Q6UB98 2062 aa11.16□□□□□ -0.62
NOD1-201ENST00000222823 PHIPQ8WWQ0 1821 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ELOA3DA6NLF2 546 aaPredicted RBP11.15□□□□□ -0.62
NOD1-201ENST00000222823 S1PR4O95977 384 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 S100GP29377 79 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 HNF1BP35680 557 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 MTTPP55157 894 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 CNPY1Q3B7I2 92 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ELOA3BQ3SY89 546 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PKDCCQ504Y2 493 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PDCD4Q53EL6 469 aaKnown RBP11.15□□□□□ -0.62
NOD1-201ENST00000222823 PJA1Q8NG27 643 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ELOA3Q8NG57 546 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 TBL1XR1Q9BZK7 514 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PLEKHA1Q9HB21 404 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 COMMD3Q9UBI1 195 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 FABP12A6NFH5 140 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 TBX1O43435 398 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 STC2O76061 302 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 GSTM3P21266 225 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 LMAN2Q12907 356 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ZBED5Q49AG3 693 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 MZB1Q8WU39 189 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 GPN1Q9HCN4 374 aaPredicted RBP11.15□□□□□ -0.62
NOD1-201ENST00000222823 PHF24Q9UPV7 400 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 CFL2Q9Y281 166 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 TEX28O15482 410 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 CHRNA1P02708 482 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ZNF865P0CJ78 1059 aaPredicted RBP11.15□□□□□ -0.62
NOD1-201ENST00000222823 KCNA5P22460 613 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 NUDT6P53370 316 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PTGR1Q14914 329 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 TOR1AIP1Q5JTV8 583 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ADNP2Q6IQ32 1131 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 OR4K1Q8NGD4 311 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 NFKBIDQ8NI38 313 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PIGKQ92643 395 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ZFP3Q96NJ6 502 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 NSUN5Q96P11 429 aaKnown RBP11.15□□□□□ -0.62
NOD1-201ENST00000222823 GSDMCQ9BYG8 508 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 COMMD4Q9H0A8 199 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ELAC1Q9H777 363 aaKnown RBP11.15□□□□□ -0.62
NOD1-201ENST00000222823 SPHK2Q9NRA0 654 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 SLCO3A1Q9UIG8 710 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 ERVK-11Q9UQG0 969 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PCDHB11Q9Y5F2 797 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 PCDHGB7Q9Y5F8 929 aa11.15□□□□□ -0.62
NOD1-201ENST00000222823 NOS1APO75052 506 aaPredicted RBP11.15□□□□□ -0.63
NOD1-201ENST00000222823 RHOP08100 348 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 GNSP15586 552 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 CD1DP15813 335 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 ATP5A1P25705 553 aaKnown RBP11.15□□□□□ -0.63
NOD1-201ENST00000222823 ZNF763Q0D2J5 394 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.63
NOD1-201ENST00000222823 NANOGP8Q6NSW7 305 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 TP53INP2Q8IXH6 220 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 GLYATL1Q969I3 302 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 TBX5Q99593 518 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 KCNS3Q9BQ31 491 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 NANOGQ9H9S0 305 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 TCF7L1Q9HCS4 588 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 HCN3Q9P1Z3 774 aa11.15□□□□□ -0.63
NOD1-201ENST00000222823 LOC100130705A0A1B0GUX0 176 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 TLR4O00206 839 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 BTN3A3O00478 584 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 SLC22A1O15245 554 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 OAZ2O95190 189 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 TNFP01375 233 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms