RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 REEP4Q9H6H4 257 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 KIR3DX1Q9H7L2 352 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 UBE2ZQ9H832 354 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 IMP3Q9NV31 184 aaKnown RBP13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 AHSPQ9NZD4 102 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 BTBD3Q9Y2F9 522 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 PLEKHM1Q9Y4G2 1056 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 HS3ST3A1Q9Y663 406 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 ATG2BQ96BY7 2078 aa13.74□□□□□ -0.21
RTFDC1-201ENST00000023939 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 GNG14A0A1W2PPG7 69 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MAGEA13PA6NCF6 341 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 RNASET2O00584 256 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MAN2B1O00754 1011 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PRICKLE3O43900 615 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 KLHL18O94889 574 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 GPX2P18283 190 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 HTR1BP28222 390 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 NDUFS1P28331 727 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MEF2AQ02078 507 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 FOLH1Q04609 750 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 SF1Q15637 639 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ATP6AP1Q15904 470 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 DEPDC1Q5TB30 811 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PRPF38BQ5VTL8 546 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PPP4R4Q6NUP7 873 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 AMIGO2Q86SJ2 522 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 SLC9B2Q86UD5 537 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MARVELD2Q8N4S9 558 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 C2orf73Q8N5S3 287 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 OR1E3Q8WZA6 343 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 N4BP2L2Q92802 583 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MIEF2Q96C03 454 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 FAM120BQ96EK7 910 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ACAT2Q9BWD1 397 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MS4A8Q9BY19 250 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 OR51B5Q9H339 312 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PIF1Q9H611 641 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 COQ10BQ9H8M1 238 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CARS2Q9HA77 564 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 OLAHQ9NV23 265 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CUEDC1Q9NWM3 386 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PCDHB11Q9Y5F2 797 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 BRWD1Q9NSI6 2320 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PDZK1P1A8MUH7 402 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 EVPLLA8MZ36 301 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 GSTA4O15217 222 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 YY2O15391 372 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 NARSO43776 548 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 TBX6O95947 436 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 B3GALT4O96024 378 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ASGR2P07307 311 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PPIBP23284 216 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 GSTM2P28161 218 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 AKT2P31751 481 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CCT8P50990 548 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CCR5P51681 352 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CLCN2P51788 898 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CLDN2P57739 230 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ABATP80404 500 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PRKCQQ04759 706 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 HKDC1Q2TB90 917 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 KHDRBS2Q5VWX1 349 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 FAM71E1Q6IPT2 247 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 GCNT7Q6ZNI0 430 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 FKBP9P1Q75LS8 142 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PGBD3Q8N328 593 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 TMEM145Q8NBT3 493 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 OR2A1Q8NGT9 310 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 GOT1L1Q8NHS2 421 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 FAM110BQ8TC76 370 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 C16orf78Q8WTQ4 265 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MYOCQ99972 504 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 SPATA9Q9BWV2 254 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 UGT2B28Q9BY64 529 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 SEMA6AQ9H2E6 1030 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 CD93Q9NPY3 652 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 PRDM8Q9NQV8 689 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ATAD3AQ9NVI7 634 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 EBF1Q9UH73 591 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 MOSPD1Q9UJG1 213 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ERVK-11Q9UQG0 969 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 COLEC10Q9Y6Z7 277 aa13.73□□□□□ -0.21
RTFDC1-201ENST00000023939 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 CHURC1-FNTBB4DL54 471 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 CLIC1O00299 241 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 CXCR6O00574 342 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 EPN2O95208 641 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 SEMA4FO95754 770 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 GSNP06396 782 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 ABCB1P08183 1280 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 FURINP09958 794 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 RAP2AP10114 183 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 GSTM5P46439 218 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 DGKEP52429 567 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 CSNK1G2P78368 415 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms