RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 WDR48Q8TAF3 677 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 RHBDD1Q8TEB9 315 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
PHGDH-224ENST00000641711 NAT14Q8WUY8 206 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 N4BP2L2Q92802 583 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-224ENST00000641711 LRRC58Q96CX6 371 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 BTBD9Q96Q07 612 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 NR1H4Q96RI1 486 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-224ENST00000641711 CCM2Q9BSQ5 444 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 DPEP2Q9H4A9 486 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 UCKL1Q9NWZ5 548 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 ARL15Q9NXU5 204 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 TAAR2Q9P1P5 351 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 RIMS3Q9UJD0 308 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
PHGDH-224ENST00000641711 LEF1Q9UJU2 399 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-224ENST00000641711 PCDHA9Q9Y5H5 950 aa9.91□□□□□ -0.82
PHGDH-224ENST00000641711 C15orf38-AP3S2A0A0A6YYH1 394 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 EME2A4GXA9 379 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 A6NCN8 305 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ASPDHA6ND91 283 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CCDC154A6NI56 674 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 OR2AG2A6NM03 316 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 AQP12BA6NM10 295 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 MANBAO00462 879 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 NME4O00746 187 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SIGLEC6O43699 453 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 NUDT21O43809 227 aaKnown RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SH3BP5O60239 455 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 POP7O75817 140 aaKnown RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CLDN9O95484 217 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 HIST1H2AGP0C0S8 130 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CKMT2P17540 419 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 EPORP19235 508 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 HIST1H2ADP20671 130 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CYP2A7P20853 494 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 PRPH2P23942 346 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SLC6A2P23975 617 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 PEX2P28328 305 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 NDUFS1P28331 727 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 IL12AP29459 219 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SLC7A1P30825 629 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 HALP42357 657 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 GDF5P43026 501 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 FASLGP48023 281 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 NME5P56597 212 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 MRPS22P82650 360 aaKnown RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 MRPS35P82673 323 aaKnown RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 DAB2P98082 770 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ZNF33BQ06732 778 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 PCDH1Q08174 1060 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 MAD2L1Q13257 205 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 C1orf61Q13536 156 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ABRAXAS2Q15018 415 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 NR6A1Q15406 480 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 NR0B2Q15466 257 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 FXNQ16595 210 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CLPPQ16740 277 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 RSPO4Q2I0M5 234 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 AP5B1Q2VPB7 878 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 DEFB133Q30KQ1 61 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ZNF658BQ4V348 819 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 C14orf28Q4W4Y0 310 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 METRNLQ641Q3 311 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SLC30A9Q6PML9 568 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CYP20A1Q6UW02 462 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ABRAXAS1Q6UWZ7 409 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ARPINQ7Z6K5 226 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SPATA24Q86W54 205 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 TICAM1Q8IUC6 712 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 AQP12AQ8IXF9 295 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 EID2Q8N6I1 236 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 RNF148Q8N7C7 305 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 L3MBTL4Q8NA19 623 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 FAM46DQ8NEK8 389 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ADCY4Q8NFM4 1077 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 PROKR1Q8TCW9 393 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ZDHHC1Q8WTX9 485 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ZFPM2Q8WW38 1151 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ASZ1Q8WWH4 475 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 SH3KBP1Q96B97 665 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 FBXL8Q96CD0 374 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 HIST1H2AHQ96KK5 128 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CNDP2Q96KP4 475 aaKnown RBP9.9□□□□□ -0.82
PHGDH-224ENST00000641711 TEX37Q96LM6 180 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 APOLD1Q96LR9 279 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 HIST1H2AJQ99878 128 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 H2AFJQ9BTM1 129 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 TRIM15Q9C019 465 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 EPB41L1Q9H4G0 881 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 ACTL8Q9H568 366 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 UCK1Q9HA47 277 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 POT1Q9NUX5 634 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 CMTM6Q9NX76 183 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 BTBD3Q9Y2F9 522 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 HEBP2Q9Y5Z4 205 aa9.9□□□□□ -0.82
PHGDH-224ENST00000641711 KCNE1BA0A087WTH5 132 aa9.89□□□□□ -0.83
PHGDH-224ENST00000641711 SLC5A10A0PJK1 596 aa9.89□□□□□ -0.83
PHGDH-224ENST00000641711 LILRA5A6NI73 299 aa9.89□□□□□ -0.83
PHGDH-224ENST00000641711 NOBOXO60393 691 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms