RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 B3GNT8Q7Z7M8 397 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 CCDC71Q8IV32 467 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-225ENST00000640209 SFTPA1Q8IWL2 248 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 SYNPOQ8N3V7 929 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 PIK3C3Q8NEB9 887 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 OR56A3Q8NH54 315 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 CLP1Q92989 425 aaKnown RBP9.03□□□□□ -0.96
NECAP1-225ENST00000640209 MUL1Q969V5 352 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 AP2M1Q96CW1 435 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 CCDC138Q96M89 665 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 FAM83CQ9BQN1 747 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 CCM2Q9BSQ5 444 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 ZSCAN5AQ9BUG6 496 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 DUSP26Q9BV47 211 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 SPNS1Q9H2V7 528 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 PLGRKTQ9HBL7 147 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-225ENST00000640209 ERVK-18Q9QC07 812 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 FAF1Q9UNN5 650 aaPredicted RBP9.03□□□□□ -0.96
NECAP1-225ENST00000640209 SAMD4AQ9UPU9 718 aaKnown RBP9.03□□□□□ -0.96
NECAP1-225ENST00000640209 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
NECAP1-225ENST00000640209 UGDHO60701 494 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 KLHL18O94889 574 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ZBTB11O95625 1053 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 NTRK1P04629 796 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ANXA4P09525 319 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ITGAMP11215 1152 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF8P17098 575 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CCNA2P20248 432 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TNFRSF1BP20333 461 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 IRS1P35568 1242 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 RANBP1P43487 201 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 MAP2K4P45985 399 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 HNRNPFP52597 415 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TMBIM6P55061 237 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 MEF2AQ02078 507 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TSTA3Q13630 321 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 KCNC3Q14003 757 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PCM1Q15154 2024 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF284Q2VY69 593 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 KDM4DQ6B0I6 523 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 DUS1LQ6P1R4 473 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 SLCO4C1Q6ZQN7 724 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FKBP9P1Q75LS8 142 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CBLL1Q75N03 491 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TMPRSS11BQ86T26 416 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FAM9CQ8IZT9 166 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 OR4K1Q8NGD4 311 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ZNF480Q8WV37 535 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CHTF18Q8WVB6 975 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 GLMNQ92990 594 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 RSPRY1Q96DX4 576 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CNDP2Q96KP4 475 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FUNDC2Q9BWH2 189 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TMEM121BQ9BXQ6 578 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 GABARAPL1Q9H0R8 117 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TM9SF3Q9HD45 589 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 GPATCH2Q9NW75 528 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FAM120CQ9NX05 1096 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PDP1Q9P0J1 537 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TMEM9Q9P0T7 183 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FZD4Q9ULV1 537 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 RUVBL1Q9Y265 456 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 NAALAD2Q9Y3Q0 740 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PCYT1BQ9Y5K3 369 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CORINQ9Y5Q5 1042 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PCDH7O60245 1069 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 LILRB5O75023 590 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ATG13O75143 517 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FABP3P05413 133 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ABCB1P08183 1280 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CISD3P0C7P0 127 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ELFN1P0C7U0 828 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 HLA-EP13747 358 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 CEBPBP17676 345 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PTPN2P17706 415 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 XPAP23025 273 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 RYKP34925 604 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 GABARAPL2P60520 117 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 MC1RQ01726 317 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 EPS8Q12929 822 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TMED1Q13445 227 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 DMC1Q14565 340 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 ZC3H12BQ5HYM0 836 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 COX20Q5RI15 118 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 Q6ZPB1 254 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 EIF3MQ7L2H7 374 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 GRASPQ7Z6J2 395 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 NAGSQ8N159 534 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PGBD3Q8N328 593 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 MRPL43Q8N983 215 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 DRAXINQ8NBI3 349 aaPredicted RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 WDR48Q8TAF3 677 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 FNDC8Q8TC99 324 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 NXPE3Q969Y0 559 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 PAWRQ96IZ0 340 aaKnown RBP9.02□□□□□ -0.97
NECAP1-225ENST00000640209 TPD52L3Q96J77 140 aa9.02□□□□□ -0.97
NECAP1-225ENST00000640209 NODALQ96S42 347 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms