RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CADM3Q8N126 398 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 C17orf47Q8NEP4 570 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 DQX1Q8TE96 717 aaKnown RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 OIT3Q8WWZ8 545 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 ATOH1Q92858 354 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 MSI2Q96DH6 328 aaKnown RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 FEVQ99581 238 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TSPYL1Q9H0U9 437 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 PIGMQ9H3S5 423 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 ROPN1Q9HAT0 212 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TMEM51Q9NW97 253 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 STK38LQ9Y2H1 464 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TTC3P53804 2025 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 COL1A2P08123 1366 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 ATG2AQ2TAZ0 1938 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TCRBV7S3A2A0A539 114 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 UBE2QL1A1L167 161 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 MCIDASD6RGH6 385 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 GNB5O14775 395 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 AP5Z1O43299 807 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 LRRTM2O43300 516 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 CIDEAO60543 219 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 ZFPL1O95159 310 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 YEATS4O95619 227 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 CCDC172P0C7W6 258 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 DANCRP0C864 163 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 USP8P40818 1118 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 NBL1P41271 181 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 ITIH3Q06033 890 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 MGAT3Q09327 533 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 SOWAHAQ2M3V2 549 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TCTN1Q2MV58 587 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 AAGABQ6PD74 315 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TMEM26Q6ZUK4 368 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 BIVMQ86UB2 503 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 SLC43A2Q8N370 569 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 CACTINQ8WUQ7 758 aaKnown RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TMEM170AQ8WVE7 144 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 SUSD6Q92537 303 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 RASD2Q96D21 266 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 RSPRY1Q96DX4 576 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 DAZAP1Q96EP5 407 aaKnown RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 MAGED4Q96JG8 741 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
NECAP1-220ENST00000639841 ATG10Q9H0Y0 220 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 TLE6Q9H808 572 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 QPCTLQ9NXS2 382 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 IL20RAQ9UHF4 553 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 MGAT4BQ9UQ53 548 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 CARD8Q9Y2G2 431 aa7.04□□□□□ -1.28
NECAP1-220ENST00000639841 A0A0U1RQV5 110 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 SNNO75324 88 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 ZNF217O75362 1048 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 PMPCBO75439 489 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 ACSL3O95573 720 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 EEF1B2P24534 225 aaKnown RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 ITPKBP27987 946 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 RYKP34925 604 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 LONP1P36776 959 aaKnown RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 LIPAP38571 399 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 SLC11A1P49279 550 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 SUCLG1P53597 346 aaKnown RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 HSD11B2P80365 405 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 DUSP6Q16828 381 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 ARL13AQ5H913 290 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 CES5AQ6NT32 575 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 EFCAB12Q6NXP0 572 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 TRMT10BQ6PF06 316 aaKnown RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 TBC1D26Q86UD7 250 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 FAM228AQ86W67 206 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 SLC35F3Q8IY50 421 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 ADGRG5Q8IZF4 528 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 CENPLQ8N0S6 344 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 FAM71CQ8NEG0 241 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 ATP8B4Q8TF62 1192 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 UBLCP1Q8WVY7 318 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 DNAJA4Q8WW22 397 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 SLC41A3Q96GZ6 507 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 CDKN2AIPNLQ96HQ2 116 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 GPA33Q99795 319 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 FAM213AQ9BRX8 229 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 FRMD8Q9BZ67 464 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-220ENST00000639841 AZI2Q9H6S1 392 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 RIOX1Q9H6W3 641 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 AGPAT3Q9NRZ7 376 aa7.03□□□□□ -1.28
NECAP1-220ENST00000639841 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 C9orf172C9J069 976 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 AKAP8O43823 692 aaKnown RBP7.02□□□□□ -1.29
NECAP1-220ENST00000639841 CNTN5O94779 1100 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 MYZAPP0CAP1 466 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 GOLGA8HP0CJ92 632 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 SPP1P10451 314 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 CREB1P16220 341 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 DUSP1P28562 367 aa7.02□□□□□ -1.29
NECAP1-220ENST00000639841 CLCN5P51795 746 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms