RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 C8orf44Q96CB5 159 aa15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 MACROD1Q9BQ69 325 aa15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 MESP1Q9BRJ9 268 aa15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 RAB17Q9H0T7 212 aa15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 MKKSQ9NPJ1 570 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 SMYD2Q9NRG4 433 aa15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 TXNDC16Q9P2K2 825 aa15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 NOVA2Q9UNW9 492 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-259ENST00000638114 RP1L1Q8IWN7 2480 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 IDSB3KWA1 339 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 CDC7O00311 574 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 LCMT2O60294 686 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 HEXBP07686 556 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 CD97P48960 835 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 CCR8P51685 355 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 PLTPP55058 493 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 SNRPNP63162 240 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 MEF2AQ02078 507 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 PPP1R3AQ16821 1122 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 FAAH2Q6GMR7 532 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 ASPGQ86U10 573 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 CCDC25Q86WR0 208 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 CEP97Q8IW35 865 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 Q8NA96 180 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 ZCCHC10Q8TBK6 192 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 PNPLA2Q96AD5 504 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 OR4K3Q96R72 315 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 ZNF160Q9HCG1 818 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 GPAMQ9HCL2 828 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 MAP10Q9P2G4 905 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 DOCK10Q96BY6 2186 aa15.9■□□□□ 0.14
CACNA1A-259ENST00000638114 PRRC2CQ9Y520 2896 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 CXorf49A8MYA2 514 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 H0YIG0 161 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 VPS4BO75351 444 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 NSA2O95478 260 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 HPP00738 406 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 SLC35G6P0C7Q6 338 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 IL1RNP18510 177 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 CXCR2P25025 360 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 CAV1Q03135 178 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ILF2Q12905 390 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 CSHL1Q14406 222 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 INPP5JQ15735 1006 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 PRR30Q53SZ7 412 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 TMEM214Q6NUQ4 689 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 IGFL3Q6UXB1 125 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 FRA10AC1Q70Z53 315 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 PRSS41Q7RTY9 318 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ZC3H7AQ8IWR0 971 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ZADH2Q8N4Q0 377 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 MFSD9Q8NBP5 474 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ABHD11Q8NFV4 315 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ANKRD49Q8WVL7 239 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 SLC13A3Q8WWT9 602 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ANKRD7Q92527 254 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 THOC3Q96J01 351 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 TSNARE1Q96NA8 513 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 EGFL8Q99944 293 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 MCMBPQ9BTE3 642 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 FAM129AQ9BZQ8 928 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 TGIF2Q9GZN2 237 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 LHPPQ9H008 270 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 POPDC3Q9HBV1 291 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 ZBTB20Q9HC78 741 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 CTNNAL1Q9UBT7 734 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 MKL2Q9ULH7 1088 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 VPS4AQ9UN37 437 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 B3GNT3Q9Y2A9 372 aa15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 MTO1Q9Y2Z2 717 aaKnown RBP15.89■□□□□ 0.13
CACNA1A-259ENST00000638114 NSG1A0A0A6YYJ2 146 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 TCRBV9S1A1TA0A576 114 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 OR1F1O43749 312 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 POU4F1Q01851 419 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 EEF1A2Q05639 463 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 CKAP4Q07065 602 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 Q0VFX4 171 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 TSNQ15631 228 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 PLEKHN1Q494U1 663 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 CATSPEREQ5SY80 951 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 AGAP7PQ5VUJ5 663 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 ATG9BQ674R7 924 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 C3orf62Q6ZUJ4 267 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 ZNF572Q7Z3I7 529 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 ADAMTSL2Q86TH1 951 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 CTAGE3PQ8IX95 158 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 TBC1D19Q8N5T2 526 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 KCT2Q8NC54 265 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 FBXO25Q8TCJ0 367 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 SLC5A11Q8WWX8 675 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 NEIL2Q969S2 332 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 TM4SF19Q96DZ7 209 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 TSPAN17Q96FV3 270 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 C16orf45Q96MC5 204 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 AGAP4Q96P64 663 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 CPNE1Q99829 537 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 UNKQ9C0B0 810 aaKnown RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 ILKAPQ9H0C8 392 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 CAB39LQ9H9S4 337 aa15.88■□□□□ 0.13
CACNA1A-259ENST00000638114 ANKHQ9HCJ1 492 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms