RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 LAS2Q8IYD9 372 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 EID3Q8N140 333 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 SLC5A11Q8WWX8 675 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 MPP4Q96JB8 637 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 DPH2Q9BQC3 489 aaPredicted RBP20.72■□□□□ 0.91
CLN6-224ENST00000638076 OR52A5Q9H2C5 316 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 TPT1P8Q9HAU6 139 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 TRPV4Q9HBA0 871 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 CCDC177Q9NQR7 707 aaPredicted RBP20.72■□□□□ 0.91
CLN6-224ENST00000638076 THEGQ9P2T0 379 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 ASF1AQ9Y294 204 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 PCDHB11Q9Y5F2 797 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 NUP214P35658 2090 aaPredicted RBP20.72■□□□□ 0.91
CLN6-224ENST00000638076 KIAA1549LQ6ZVL6 1849 aa20.72■□□□□ 0.91
CLN6-224ENST00000638076 HPCAL1P37235 193 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 MYBPC3Q14896 1274 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 PIP5KL1Q5T9C9 394 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 EGFLAMQ63HQ2 1017 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 PTOV1Q86YD1 416 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 CPA6Q8N4T0 437 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 VPS37AQ8NEZ2 397 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 SNX19Q92543 992 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 RAB7BQ96AH8 199 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 COX14Q96I36 57 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 RBM4BQ9BQ04 359 aaKnown RBP20.71■□□□□ 0.91
CLN6-224ENST00000638076 RBM4Q9BWF3 364 aaKnown RBP20.71■□□□□ 0.91
CLN6-224ENST00000638076 SPNS1Q9H2V7 528 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 SH3BP4Q9P0V3 963 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 BTNL2Q9UIR0 455 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 MAPRE3Q9UPY8 281 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 U3KQV3 271 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 FOXE1O00358 373 aaPredicted RBP20.71■□□□□ 0.91
CLN6-224ENST00000638076 E2F6O75461 281 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 TGFB1P01137 390 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 HOXB6P17509 224 aaKnown RBP20.71■□□□□ 0.91
CLN6-224ENST00000638076 DCTP40126 519 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 HIST2H2ACQ16777 129 aaPredicted RBP20.71■□□□□ 0.91
CLN6-224ENST00000638076 CPZQ66K79 652 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 ANKRD34AQ69YU3 496 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 HIST2H2AA3Q6FI13 130 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 GALNT18Q6P9A2 607 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 NXPE4Q6UWF7 544 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 CAMKMTQ7Z624 323 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 HEATR4Q86WZ0 1026 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 ZDHHC21Q8IVQ6 265 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 OR5K1Q8NHB7 308 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 RDH12Q96NR8 316 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 IL17FQ96PD4 163 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 DMRT3Q9NQL9 472 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 PLAGL1Q9UM63 463 aa20.71■□□□□ 0.91
CLN6-224ENST00000638076 COL4A3Q01955 1670 aa20.7■□□□□ 0.91
CLN6-224ENST00000638076 SAP18O00422 153 aaKnown RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 KAT7O95251 611 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 GBAP04062 536 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 PCCBP05166 539 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 SHMT2P34897 504 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 MAGEA2P43356 314 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 SH3BGRP55822 239 aaPredicted RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 CCNYL2Q5T2Q4 361 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 PNCKQ6P2M8 343 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 ERICH5Q6P6B1 374 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 GALNT10Q86SR1 603 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 OR5AR1Q8NGP9 310 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 ADAMTS16Q8TE57 1224 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 COQ8BQ96D53 544 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 OR51B5Q9H339 312 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 EHD1Q9H4M9 534 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 IGFLR1Q9H665 355 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 USE1Q9NZ43 259 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 RSL24D1Q9UHA3 163 aaKnown RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 YBX2Q9Y2T7 364 aaKnown RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 IGLON5A6NGN9 336 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 PRKACGP22612 351 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 YAP1P46937 504 aaKnown RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 C16orf72Q14CZ0 275 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 PCM1Q15154 2024 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 ANXA8L1Q5VT79 327 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 UNC5DQ6UXZ4 953 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 ARMCX6Q7L4S7 300 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 COMMD6Q7Z4G1 85 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 C2orf73Q8N5S3 287 aaPredicted RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 PHF12Q96QT6 1004 aa20.7■□□□□ 0.9
CLN6-224ENST00000638076 EXO1Q9UQ84 846 aaKnown RBP20.7■□□□□ 0.9
CLN6-224ENST00000638076 DRD3P35462 400 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 ZNF763Q0D2J5 394 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 FCHO2Q0JRZ9 810 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 C10orf62Q5T681 223 aaPredicted RBP20.69■□□□□ 0.9
CLN6-224ENST00000638076 FAM46CQ5VWP2 391 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 ADAMTSL4Q6UY14 1074 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 PDZD3Q86UT5 571 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 AMZ2Q86W34 360 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 PGBD3Q8N328 593 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 LGR4Q9BXB1 951 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 YTHDF1Q9BYJ9 559 aaKnown RBP20.69■□□□□ 0.9
CLN6-224ENST00000638076 PLA2G2FQ9BZM2 168 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 FAM118AQ9NWS6 357 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 SLC23A2Q9UGH3 650 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 FZD4Q9ULV1 537 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 C1orf226A1L170 272 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms