RNA–Protein interactions for RNA: ENST00000638063.1

AMT-256, Transcript of aminomethyltransferase, human

TSL 5 BASIC

Gene AMT, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-256	ENST00000638063	PARD6A	Q9NPB6	346 aa		13.62	□□□□□ -0.23
AMT-256	ENST00000638063	FARSB	Q9NSD9	589 aa	Known RBP	13.62	□□□□□ -0.23
AMT-256	ENST00000638063	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.62	□□□□□ -0.23
AMT-256	ENST00000638063	FTSJ1	Q9UET6	329 aa		13.62	□□□□□ -0.23
AMT-256	ENST00000638063	ZFP69B	Q9UJL9	534 aa		13.62	□□□□□ -0.23
AMT-256	ENST00000638063	CCL27	Q9Y4X3	112 aa		13.62	□□□□□ -0.23
AMT-256	ENST00000638063	AP1M2	Q9Y6Q5	423 aa		13.62	□□□□□ -0.23
AMT-256	ENST00000638063	FRYL	O94915	3013 aa		13.62	□□□□□ -0.23
AMT-256	ENST00000638063	MDC1	Q14676	2089 aa	Known RBP	13.62	□□□□□ -0.23
AMT-256	ENST00000638063	RRP9	O43818	475 aa	Known RBP	13.61	□□□□□ -0.23
AMT-256	ENST00000638063	CLEC3A	O75596	197 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	CPNE6	O95741	557 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PCNA	P12004	261 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	MYF5	P13349	255 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	LSS	P48449	732 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PPP1CA	P62136	330 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	TUBB3	Q13509	450 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	RBBP5	Q15291	538 aa	Known RBP	13.61	□□□□□ -0.23
AMT-256	ENST00000638063	IMPG1	Q17R60	797 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	AASDH	Q4L235	1098 aa	Predicted RBP	13.61	□□□□□ -0.23
AMT-256	ENST00000638063	ATP6AP1L	Q52LC2	224 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PERM1	Q5SV97	790 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	FCRL6	Q6DN72	434 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	RNF44	Q7L0R7	432 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PRSS42	Q7Z5A4	293 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	TRIM73	Q86UV7	250 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	KMT5C	Q86Y97	462 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	NAXD	Q8IW45	347 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	FAM20C	Q8IXL6	584 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PARP9	Q8IXQ6	854 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	3e-6	■■■■□ 22.2
AMT-256	ENST00000638063	C19orf47	Q8N9M1	422 aa	Known RBP	13.61	□□□□□ -0.23
AMT-256	ENST00000638063	ANKRD53	Q8N9V6	530 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	MFSD9	Q8NBP5	474 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	TRPV3	Q8NET8	790 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	WDR48	Q8TAF3	677 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	IFI44	Q8TCB0	444 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	TUBGCP3	Q96CW5	907 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	TCTN2	Q96GX1	697 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	TRAPPC9	Q96Q05	1148 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	MTERF1	Q99551	399 aa	Known RBP	13.61	□□□□□ -0.23
AMT-256	ENST00000638063	ZFYVE21	Q9BQ24	234 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	ACPT	Q9BZG2	426 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.61	□□□□□ -0.23
AMT-256	ENST00000638063	DMRT3	Q9NQL9	472 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PILRA	Q9UKJ1	303 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	PCDHGA4	Q9Y5G9	962 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	MYO15A	Q9UKN7	3530 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	ASXL3	Q9C0F0	2248 aa		13.61	□□□□□ -0.23
AMT-256	ENST00000638063	MAGEB17	A8MXT2	336 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	HAT1	O14929	419 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	LSM1	O15116	133 aa	Known RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	MAP3K7	O43318	606 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	OR1F1	O43749	312 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	DCTN3	O75935	186 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ZBTB11	O95625	1053 aa	Predicted RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ACPP	P15309	386 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	LBP	P18428	481 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	PTX3	P26022	381 aa	Predicted RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	PPM1F	P49593	454 aa	Predicted RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	NEK2	P51955	445 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ARFIP1	P53367	373 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	MAD2L1	Q13257	205 aa	Predicted RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	CUL3	Q13618	768 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	LSM12	Q3MHD2	195 aa	Known RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	TMEM71	Q6P5X7	295 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	PRR11	Q96HE9	360 aa	Predicted RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	TGM7	Q96PF1	710 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	OR52B2	Q96RD2	323 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	SERPINI1	Q99574	410 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	CDC6	Q99741	560 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	MAP3K3	Q99759	626 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	LRRN3	Q9H3W5	708 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	RXFP3	Q9NSD7	469 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	PDP2	Q9P2J9	529 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	VPS29	Q9UBQ0	182 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	TMED5	Q9Y3A6	229 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	PTGDR2	Q9Y5Y4	395 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ASCC3	Q8N3C0	2202 aa	Known RBP	13.6	□□□□□ -0.23
AMT-256	ENST00000638063	UNC13C	Q8NB66	2214 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ATP6AP2	A0A1C7CYW4	349 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	FEZF1	A0PJY2	475 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	CCDC22	O60826	627 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	CBFA2T3	O75081	653 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ATP6AP2	O75787	350 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	SEMA3D	O95025	777 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	SERPINA6	P08185	405 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ANKRD34C	P0C6C1	535 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	ST6GAL1	P15907	406 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	CSF2RB	P32927	897 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	BCL6	P41182	706 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	GFER	P55789	205 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	CFHR1	Q03591	330 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	NR6A1	Q15406	480 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	AMZ1	Q400G9	498 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	SGO1	Q5FBB7	561 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	MANEA	Q5SRI9	462 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	NKAIN2	Q5VXU1	208 aa		13.6	□□□□□ -0.23
AMT-256	ENST00000638063	FBXO42	Q6P3S6	717 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms