RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 STATHP02808 62 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 ICAM2P13598 275 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 SLC12A2P55011 1212 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 SKP1P63208 163 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 EEF1A2Q05639 463 aaKnown RBP17.98■□□□□ 0.47
CLN6-221ENST00000637494 STRA8Q7Z7C7 330 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 ZBED8Q8IZ13 594 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 ARHGEF39Q8N4T4 335 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 OR9A4Q8NGU2 314 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 SLC13A3Q8WWT9 602 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 FBXL8Q96CD0 374 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 PDLIM5Q96HC4 596 aaKnown RBP17.98■□□□□ 0.47
CLN6-221ENST00000637494 LMF1Q96S06 567 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 SYNPO2LQ9H987 977 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 PLAC1Q9HBJ0 212 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 ZBTB20Q9HC78 741 aaPredicted RBP17.98■□□□□ 0.47
CLN6-221ENST00000637494 TXNDC16Q9P2K2 825 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 C19orf25Q9UFG5 118 aaPredicted RBP17.98■□□□□ 0.47
CLN6-221ENST00000637494 NOVA2Q9UNW9 492 aaKnown RBP17.98■□□□□ 0.47
CLN6-221ENST00000637494 SNX24Q9Y343 169 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 DYRK1BQ9Y463 629 aa17.98■□□□□ 0.47
CLN6-221ENST00000637494 FLNBO75369 2602 aaKnown RBP17.98■□□□□ 0.47
CLN6-221ENST00000637494 FEZF1A0PJY2 475 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 FAM187AA6NFU0 413 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 TCP11X1B4DZS4 312 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 TSPAN12O95859 305 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 CYC1P08574 325 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 C8orf89P0DMQ9 161 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 COX6A1P12074 109 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 NPPBP16860 134 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 RPL21P46778 160 aaKnown RBP17.97■□□□□ 0.47
CLN6-221ENST00000637494 MFAP5Q13361 173 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 CSHL1Q14406 222 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 TLR1Q15399 786 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 SYT16Q17RD7 645 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 MINDY4Q4G0A6 757 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 CRB2Q5IJ48 1285 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 IGFL2Q6UWQ7 119 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 LINC00696Q6ZRV3 163 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 RIPOR1Q6ZS17 1223 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 FRA10AC1Q70Z53 315 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 VN1R4Q7Z5H5 301 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 MFSD9Q8NBP5 474 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 OR56A3Q8NH54 315 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 ZCCHC10Q8TBK6 192 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 PYROXD1Q8WU10 500 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 CDKL2Q92772 493 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 PYCR2Q96C36 320 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 OLFM1Q99784 485 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 ASF1BQ9NVP2 202 aa17.97■□□□□ 0.47
CLN6-221ENST00000637494 HEATR5BQ9P2D3 2071 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 IGHV1-45A0A0A0MS14 117 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 FAM95CA0A1B0GW59 222 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 DYTNA2CJ06 578 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 E7ESA3 106 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 OR1F1O43749 312 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 BMP10O95393 424 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 SERPINA7P05543 415 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 PRR35P0CG20 571 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 ZNF37AP17032 561 aaPredicted RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 CASQ1P31415 396 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 BCL6P41182 706 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 ARG2P78540 354 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 MAT1AQ00266 395 aaKnown RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 Q0VFX4 171 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 CDC16Q13042 620 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 ZNF169Q14929 603 aaPredicted RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 NR6A1Q15406 480 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 B3GNTL1Q67FW5 361 aaPredicted RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 TMEM214Q6NUQ4 689 aaKnown RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 NIPAL1Q6NVV3 410 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 CUZD1Q86UP6 607 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 ZC3HC1Q86WB0 502 aaKnown RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 ZC3H7AQ8IWR0 971 aaKnown RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 OR51Q1Q8NH59 317 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 PRR7Q8TB68 274 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 ANKRD7Q92527 254 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 TM4SF19Q96DZ7 209 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 C19orf60Q96EN9 201 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 EGFL8Q99944 293 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 WDR83Q9BRX9 315 aaKnown RBP17.96■□□□□ 0.47
CLN6-221ENST00000637494 TUBB6Q9BUF5 446 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 SH2B3Q9UQQ2 575 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 PCDHGA10Q9Y5H3 936 aa17.96■□□□□ 0.47
CLN6-221ENST00000637494 SETXQ7Z333 2677 aaKnown RBP17.95■□□□□ 0.46
CLN6-221ENST00000637494 MDC1Q14676 2089 aaKnown RBP17.95■□□□□ 0.46
CLN6-221ENST00000637494 A0A1W2PQ72 361 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 TRBC2A0A5B9 178 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 SERPIND1P05546 499 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 IL1RNP18510 177 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 TSFMP43897 325 aaKnown RBP17.95■□□□□ 0.46
CLN6-221ENST00000637494 XCR1P46094 333 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 RGS1Q08116 209 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 HERC3Q15034 1050 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 CAPN12Q6ZSI9 719 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 ABHD11Q8NFV4 315 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 SLC5A11Q8WWX8 675 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 MACROD1Q9BQ69 325 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 ERP44Q9BS26 406 aa17.95■□□□□ 0.46
CLN6-221ENST00000637494 ZNF700Q9H0M5 742 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms