RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 VAT1LQ9HCJ6 419 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 CSNK1G1Q9HCP0 422 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 CCNB1IP1Q9NPC3 277 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 CHST11Q9NPF2 352 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 MKKSQ9NPJ1 570 aaPredicted RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 ZNF302Q9NR11 478 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 TREX1Q9NSU2 369 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 PLCXD1Q9NUJ7 323 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 LIN7CQ9NUP9 197 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 PARPBPQ9NWS1 579 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 OSER1Q9NX31 292 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 CNOT2Q9NZN8 540 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 MARCH2Q9P0N8 246 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 ATXN10Q9UBB4 475 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 FTSJ1Q9UET6 329 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 CYB5R1Q9UHQ9 305 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 MAGEL2Q9UJ55 1249 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 TINAGQ9UJW2 476 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 TMCO1Q9UM00 188 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 FAF1Q9UNN5 650 aaPredicted RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 GINS2Q9Y248 185 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 DRG1Q9Y295 367 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 AAR2Q9Y312 384 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 RBMX2Q9Y388 322 aaKnown RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 ENTPD2Q9Y5L3 495 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 SF3B1O75533 1304 aaKnown RBP eCLIP2.9□□□□□ -1.95
VIM-210ENST00000637053 MN1Q10571 1320 aaPredicted RBP2.9□□□□□ -1.95
VIM-210ENST00000637053 ZNF541Q9H0D2 1346 aa2.9□□□□□ -1.95
VIM-210ENST00000637053 A0A0A6YYH2 397 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NPHP3-ACAD11A0A0J9YXS1 232 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 A0A1W2PRB8 838 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 A0A1W2PRG0 241 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 A0A1W2PRX2 142 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PLSCR5A0PG75 271 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 RAB19A4D1S5 217 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 TUBAL3A6NHL2 446 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 A6NJ64 397 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SLC38A8A6NNN8 435 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 WASHC1A8K0Z3 465 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 A8MUI8 341 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 WASH3PC4AMC7 463 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PRSS44E7EML9 344 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 E7ESA3 106 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NPIPA2E9PIF3 369 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 WWP2O00308 870 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PPM1DO15297 605 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 MAGEB2O15479 319 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 INSIG1O15503 277 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PSMD3O43242 534 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 KDELR3O43731 214 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 FCMRO60667 390 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NDUFS3O75489 264 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 STX11O75558 287 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 RPS6KA5O75582 802 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 GLCEO94923 617 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ZBTB11O95625 1053 aaPredicted RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 CER1O95813 267 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NDUFB10O96000 172 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 IFNA6P05013 189 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CHRM5P08912 532 aaPredicted RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 ANXA4P09525 319 aaPredicted RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 CTXN2P0C2S0 81 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PNMTP11086 282 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ACP5P13686 325 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CEACAM1P13688 526 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 TPH1P17752 444 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 UGT1A6P19224 532 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 MAGP20916 626 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CNR1P21554 472 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 TGM2P21980 687 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 MMP8P22894 467 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CMA1P23946 247 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SLC6A2P23975 617 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 IL12BP29460 328 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PRDX6P30041 224 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PTPN7P35236 360 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ACTR1BP42025 376 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PTPN9P43378 593 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 KCNJ3P48549 501 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CLK3P49761 638 aaKnown RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 NDUFV1P49821 464 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 RAB9AP51151 201 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 SUOXP51687 545 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CNN1P51911 297 aaKnown RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 CEBPGP53567 150 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 UCP3P55916 312 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 SPCS3P61009 180 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 GPC5P78333 572 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 EFNB1P98172 346 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 GHRHRQ02643 423 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 CSTF1Q05048 431 aaKnown RBP2.89□□□□□ -1.95
VIM-210ENST00000637053 RBPJQ06330 500 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 TRAF2Q12933 501 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 MADCAM1Q13477 382 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 NAE1Q13564 534 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 PEX6Q13608 980 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 RUNX2Q13950 521 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 ARHGEF7Q14155 803 aa2.89□□□□□ -1.95
VIM-210ENST00000637053 DRAP1Q14919 205 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms