RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CIDECQ96AQ7 238 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 FAM210AQ96ND0 272 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 MARCH7Q9H992 704 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 AKIP1Q9NQ31 210 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 MGAT4DA6NG13 374 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 TGFB1P01137 390 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 INHAP05111 366 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 ATP1B2P14415 290 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 FPR1P21462 350 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 EPHB3P54753 998 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 GSTM4Q03013 218 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 STARD3Q14849 445 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 HMGN2P46Q86SG4 172 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 TMPRSS11BQ86T26 416 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 SCRN2Q96FV2 425 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 CHCHD6Q9BRQ6 235 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC12A9Q9BXP2 914 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC29A3Q9BZD2 475 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 DCSTAMPQ9H295 470 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 TM9SF3Q9HD45 589 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SUV39H1O43463 412 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 TSPAN6O43657 245 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 GRK5P34947 590 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC19A1P41440 591 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 OXA1LQ15070 435 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 GPR33Q49SQ1 333 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 CPTPQ5TA50 214 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 HSD11B1LQ7Z5J1 315 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 THOC6Q86W42 341 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 FAM83FQ8NEG4 500 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 C2orf15Q8WU43 125 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 CNDP2Q96KP4 475 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 NIPSNAP1Q9BPW8 284 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 TCF25Q9BQ70 676 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 CORO1BQ9BR76 489 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 RIOK2Q9BVS4 552 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SORBS1Q9BX66 1292 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 OR51B5Q9H339 312 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 DUSP21Q9H596 190 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 DNMT3BQ9UBC3 853 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 RNF6Q9Y252 685 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 AIREO43918 545 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SOAT1P35610 550 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 TPTEP56180 551 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SNRPD1P62314 119 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 RPS26P62854 115 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SYTL3Q4VX76 610 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 CCDC103Q8IW40 242 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 APH1BQ8WW43 257 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 Q96MT0 163 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 ZNF300Q96RE9 604 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 OR51E2Q9H255 320 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 MAGIXQ9H6Y5 334 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 MRPL17Q9NRX2 175 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 HCFC1R1Q9NWW0 138 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 INSL5Q9Y5Q6 135 aa13.54□□□□□ -0.24
CACNA1A-228ENST00000636610 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 SCN2BO60939 215 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 DLGAP3O95886 979 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 CYP2A7P20853 494 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 RPS13P62277 151 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 SPIBQ01892 262 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 LRRC74AQ0VAA2 488 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 DMC1Q14565 340 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 RFX4Q33E94 735 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 LHX8Q68G74 356 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 MFSD4AQ8N468 514 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 Q8N9G6 341 aaPredicted RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 OR4K3Q96R72 315 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 MAN2B2Q9Y2E5 1009 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 SCN5AQ14524 2016 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 TNFRSF11BO00300 401 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 KPNA5O15131 536 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC22A1O15245 554 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 FEN1P39748 380 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 SPINT3P49223 89 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 ZNF385BQ569K4 471 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 OR6Q1Q8NGQ2 317 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 DYNC2LI1Q8TCX1 351 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 LINC00597Q9H2U6 94 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 RDH14Q9HBH5 336 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 GIN1Q9NXP7 522 aa13.53□□□□□ -0.24
CACNA1A-228ENST00000636610 NDRG4Q9ULP0 352 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms