RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 CCDC3Q9BQI4 270 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 DPH7Q9BTV6 452 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 MRPL1Q9BYD6 325 aaKnown RBP9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 NMUR2Q9GZQ4 415 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 ABCG4Q9H172 646 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 MYLK2Q9H1R3 596 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 MMADHCQ9H3L0 296 aaPredicted RBP9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 SEMA6CQ9H3T2 930 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 EFCAB1Q9HAE3 211 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 CAPN10Q9HC96 672 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 ATAD3AQ9NVI7 634 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 CIDEBQ9UHD4 219 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 ZNF225Q9UK10 706 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 ADAM29Q9UKF5 820 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 PADI4Q9UM07 663 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 KLK4Q9Y5K2 254 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 ST14Q9Y5Y6 855 aa9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 TNRC6BQ9UPQ9 1833 aaKnown RBP9.75□□□□□ -0.85
FOXCUT-201ENST00000628509 TP53BP1Q12888 1972 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 A0A1W2PPV9 198 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 TLCD2A6NGC4 264 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 TOX3O15405 576 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 CFLARO15519 480 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 ZSCAN9O15535 394 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 FLRT2O43155 660 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 PRICKLE3O43900 615 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 NOBOXO60393 691 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SRPX2O60687 465 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SDC3O75056 442 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 LRP3O75074 770 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SLC22A3O75751 556 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 UNC5CO95185 931 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 IL6P05231 212 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 RETP07949 1114 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SNRPB2P08579 225 aaKnown RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 KRT16P08779 473 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 PRR35P0CG20 571 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 UGT2B7P16662 529 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 POLR2CP19387 275 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 GRK6P43250 576 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 RPL38P63173 70 aaKnown RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 CSNK1G2P78368 415 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 DAB2P98082 770 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 BNIP1Q12981 228 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SRSF5Q13243 272 aaKnown RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SLC14A1Q13336 389 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 ART3Q13508 389 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 NDUFA9Q16795 377 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 LACTB2Q53H82 288 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 CATSPEREQ5SY80 951 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 TRIM40Q6P9F5 258 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 C16orf89Q6UX73 402 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 IKBIPQ70UQ0 350 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 MAVSQ7Z434 540 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 C2orf73Q8N5S3 287 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 MFSD9Q8NBP5 474 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 RGMAQ96B86 450 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 MTFMTQ96DP5 389 aaKnown RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 TCTN2Q96GX1 697 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 CATSPER2Q96P56 530 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 MTERF1Q99551 399 aaKnown RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 ZFYVE21Q9BQ24 234 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 DPY30Q9C005 99 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 BRINP2Q9C0B6 783 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 CHRNA10Q9GZZ6 450 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 RMND5AQ9H871 391 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 COPS7BQ9H9Q2 264 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 FANCEQ9HB96 536 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 DMRT3Q9NQL9 472 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SDR39U1Q9NRG7 319 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 TMEM74BQ9NUR3 256 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 AIG1Q9NVV5 245 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 GID8Q9NWU2 228 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SIRT5Q9NXA8 310 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 POMT2Q9UKY4 750 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 PNMA8BQ9ULN7 279 aaPredicted RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 NDUFAF1Q9Y375 327 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 AP1M2Q9Y6Q5 423 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 SPACA6W5XKT8 324 aa9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 TDRD6O60522 2096 aaKnown RBP9.74□□□□□ -0.85
FOXCUT-201ENST00000628509 GNG14A0A1W2PPG7 69 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 CFAP73A6NFT4 308 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 MAGEB17A8MXT2 336 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 BTN3A3O00478 584 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 ANGPT2O15123 496 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 EML2O95834 649 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 NPPAP01160 153 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 PRPS1L1P21108 318 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 VARSP26640 1264 aaKnown RBP9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 ALDH4A1P30038 563 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 HPCAL1P37235 193 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 GRIA3P42263 894 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 SCTRP47872 440 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 MAZP56270 477 aaKnown RBP9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 TRA2BP62995 288 aaKnown RBP9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 KLF10Q13118 480 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 TUBB3Q13509 450 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 NR1D2Q14995 579 aa9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 ZXDCQ2QGD7 858 aaPredicted RBP9.73□□□□□ -0.85
FOXCUT-201ENST00000628509 GLIPR1L2Q4G1C9 344 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms