RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MED8Q96G25 268 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 PNMA8BQ9ULN7 279 aaPredicted RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 RUVBL1Q9Y265 456 aaKnown RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 ZNF451Q9Y4E5 1061 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 GABRR3A8MPY1 467 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ADAM23O75077 832 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ETHE1O95571 254 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 BMP4P12644 408 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 FAHD1Q6P587 224 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 ENTHD1Q8IYW4 607 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 APH1BQ8WW43 257 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 C7orf34Q96L11 122 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 RUBCNLQ9H714 662 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 SPATA6Q9NWH7 488 aaPredicted RBP10.88□□□□□ -0.67
VARS2-213ENST00000625423 HS3ST2Q9Y278 367 aa10.88□□□□□ -0.67
VARS2-213ENST00000625423 SCN5AQ14524 2016 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 ARHGEF33A8MVX0 844 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 C9P02748 559 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 URODP06132 367 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 PCSK2P16519 638 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 KCNJ10P78508 379 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 NAE1Q13564 534 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 VEZF1Q14119 521 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 ARHGEF6Q15052 776 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 HKDC1Q2TB90 917 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 PROX2Q3B8N5 592 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.87□□□□□ -0.67
VARS2-213ENST00000625423 GPR153Q6NV75 609 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 Q6ZVU0 165 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 PRSS48Q7RTY5 328 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 C1orf52Q8N6N3 182 aaKnown RBP10.87□□□□□ -0.67
VARS2-213ENST00000625423 MYLIPQ8WY64 445 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 CCNB1IP1Q9NPC3 277 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 PLXNB3Q9ULL4 1909 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 SCAMP2O15127 329 aaKnown RBP10.87□□□□□ -0.67
VARS2-213ENST00000625423 SGTAO43765 313 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 FKTNO75072 461 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
VARS2-213ENST00000625423 VIPP01282 170 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 CD36P16671 472 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 RRM2P31350 389 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 SERPINB10P48595 397 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 CASP9P55211 416 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 CD300CQ08708 224 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 CCSMST1Q4G0I0 132 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 ZDHHC20Q5W0Z9 365 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 OR6Q1Q8NGQ2 317 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 ASZ1Q8WWH4 475 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 DNASE1L2Q92874 299 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 LGALS12Q96DT0 336 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 KCNC2Q96PR1 638 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 BTBD2Q9BX70 525 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 SGK2Q9HBY8 427 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 CEP290O15078 2479 aa10.87□□□□□ -0.67
VARS2-213ENST00000625423 SUV39H1O43463 412 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 ABCB1P08183 1280 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 RAE1P78406 368 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 MVKQ03426 396 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 GAB1Q13480 694 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 HIST2H2ACQ16777 129 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.86□□□□□ -0.67
VARS2-213ENST00000625423 CPTPQ5TA50 214 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 HSD11B1LQ7Z5J1 315 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 NAGSQ8N159 534 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 LILRA3Q8N6C8 439 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 GPR156Q8NFN8 814 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 MAGEB10Q96LZ2 347 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 PITX2Q99697 317 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 CPEB1Q9BZB8 566 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 FBXO8Q9NRD0 319 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 TMEM184CQ9NVA4 438 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 PCDHGA6Q9Y5G7 932 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 A0A1W2PRU2 124 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 OR2A25A4D2G3 310 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 LEFTY2O00292 366 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 KPNA5O15131 536 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 TEX28O15482 410 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 UGDHO60701 494 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 MYO1DO94832 1006 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 ANXA4P09525 319 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 TGFBR2P37173 567 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 DNASE1L3Q13609 305 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 RGNQ15493 299 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 SYT16Q17RD7 645 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 AGTRAPQ6RW13 159 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 Q6ZVL8 140 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 PAGE2Q7Z2X7 111 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 SLC39A11Q8N1S5 342 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 CPA6Q8N4T0 437 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 ERLEC1Q96DZ1 483 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 C11orf24Q96F05 449 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 OR4K3Q96R72 315 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 CHST8Q9H2A9 424 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 FAM83DQ9H4H8 585 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.86□□□□□ -0.679e-8■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms