RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 STARD7Q9NQZ5 370 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PTTG3PQ9NZH4 202 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MGAT4CQ9UBM8 478 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 LCHNA4D1U4 455 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 EBLN1P0CF75 366 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 DAOAP59103 153 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 E2F1Q01094 437 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 OR4F3Q6IEY1 312 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ARL9Q6T311 187 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SPARTQ8N0X7 666 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 TM6SF2Q9BZW4 377 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ACSL5Q9ULC5 683 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MAFBQ9Y5Q3 323 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 TLX2O43763 284 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 IFNA21P01568 189 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PET100P0DJ07 73 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 CDK6Q00534 326 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GALNT1Q10472 559 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 DACT2Q5SW24 774 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ZNF227Q86WZ6 799 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SNX29P2Q8IUI4 249 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 OR10H5Q8NGA6 315 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ZFP90Q8TF47 636 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SNAPC3Q92966 411 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GPR88Q9GZN0 384 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 BIN3Q9NQY0 253 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 AIG1Q9NVV5 245 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SCP2D1Q9UJQ7 156 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 NOP16Q9Y3C1 178 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 MYH4Q9Y623 1939 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MCIDASD6RGH6 385 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PCDH17O14917 1159 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MT-ND5P03915 603 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 NRIP1P48552 1158 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CDH11P55287 796 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SPHARQ15513 63 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 NTRK2Q16620 822 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ADGRG2Q8IZP9 1017 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ABHD16BQ9H3Z7 469 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 LYARQ9NX58 379 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 SMPD4Q9NXE4 827 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CCL15-CCL14A0A0B4J2E2 113 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PRSS51A0A1B0GVH4 220 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CBSLP0DN79 551 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GGT1P19440 569 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MAPK3P27361 379 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 CBSP35520 551 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CASP3P42574 277 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PRKCDQ05655 676 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 AIMP2Q13155 320 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 EIF4HQ15056 248 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 CCL15Q16663 113 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PPP1R3AQ16821 1122 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SLC22A10Q63ZE4 541 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SLC30A6Q6NXT4 461 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GOLGA7Q7Z5G4 137 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 NEIL3Q8TAT5 605 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 RANBP9Q96S59 729 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CDADC1Q9BWV3 514 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MROQ9BYG7 248 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 OSBPL2Q9H1P3 480 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 CPSF4LA6NMK7 179 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 C9IYK1 514 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 MANBAO00462 879 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PCDH7O60245 1069 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ACSL4O60488 711 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GKN3PP0CG01 181 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 EDNRAP25101 427 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 NSG1P42857 185 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 TECRLQ5HYJ1 363 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 PYHIN1Q6K0P9 492 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 LINC00299Q6ZSB3 139 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 TICAM1Q8IUC6 712 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GALNT13Q8IUC8 556 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GATAD2BQ8WXI9 593 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 SLC9A6Q92581 669 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 CDK15Q96Q40 435 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 GPER1Q99527 375 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 ZNF334Q9HCZ1 680 aaPredicted RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 MRTO4Q9UKD2 239 aaKnown RBP8.66□□□□□ -1.02
VCL-206ENST00000623461 PADI2Q9Y2J8 665 aa8.66□□□□□ -1.02
VCL-206ENST00000623461 A0A1W2PQH9 124 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 PROM1O43490 865 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 LHCGRP22888 699 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 PDHA2P29803 388 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 SNRPD2P62316 118 aaKnown RBP8.65□□□□□ -1.02
VCL-206ENST00000623461 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
VCL-206ENST00000623461 SLC10A7Q0GE19 358 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 LRRC69Q6ZNQ3 347 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 CATSPERGQ6ZRH7 1159 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 OR4F6Q8NGB9 312 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 TBC1D15Q8TC07 691 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 GNPDA2Q8TDQ7 276 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 CXorf40AQ8TE69 158 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 OSTF1Q92882 214 aa8.65□□□□□ -1.02
VCL-206ENST00000623461 EXOSC8Q96B26 276 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms