RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 GLB1P16278 677 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 AMD1P17707 334 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 PIK3R1P27986 724 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 AHRP35869 848 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 GRIA3P42263 894 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 SCTRP47872 440 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 CCT8P50990 548 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 RPS13P62277 151 aaKnown RBP13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 CUL3Q13618 768 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 PDCD4Q53EL6 469 aaKnown RBP13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 SPIN4Q56A73 249 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 IL23RQ5VWK5 629 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 ZCCHC8Q6NZY4 707 aaKnown RBP13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 KANSL1Q7Z3B3 1105 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 ANKRD53Q8N9V6 530 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 TBC1D10AQ9BXI6 508 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 GAREM1Q9H706 876 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 PRM3Q9NNZ6 103 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 SIRT5Q9NXA8 310 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 ZIM2Q9NZV7 527 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 FEZF1A0PJY2 475 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 RHPN2P1A8MT19 583 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 OR1F1O43749 312 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 CLEC3AO75596 197 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 PRPS2P11908 318 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 EZRP15311 586 aaKnown RBP13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 GPX3P22352 226 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 GPR3P46089 330 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 ADNP2Q6IQ32 1131 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 ZNF438Q7Z4V0 828 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 PAQR7Q86WK9 346 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 ZNF761Q86XN6 746 aaPredicted RBP13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■■■■ 92.8
CLTCL1-212ENST00000622493 KYQ8NBH2 561 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 OR6C4Q8NGE1 309 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 OR4C6Q8NH72 309 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 C11orf24Q96F05 449 aaPredicted RBP13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 FCRL1Q96LA6 429 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 C1orf50Q9BV19 199 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 RAB33BQ9H082 229 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 EPB41L1Q9H4G0 881 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 LRIT1Q9P2V4 623 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 MCM8Q9UJA3 840 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 RAB23Q9ULC3 237 aa13.64□□□□□ -0.23
CLTCL1-212ENST00000622493 A0A0J9YY10 115 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 OR2A25A4D2G3 310 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 FAM86C2PA6NEL3 165 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 ZW10O43264 779 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 COX4I1P13073 169 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 MPLP40238 635 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 CAPZBP47756 277 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 RPS15AP62244 130 aaKnown RBP13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 ACSM2AQ08AH3 577 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 CYLC2Q14093 348 aaPredicted RBP13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 NR1D2Q14995 579 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 SPRED3Q2MJR0 410 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 ACSM2BQ68CK6 577 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 CYP20A1Q6UW02 462 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 RNF175Q8N4F7 328 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 TRPV3Q8NET8 790 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 TSPEARQ8WU66 669 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 CHTF18Q8WVB6 975 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 RSC1A1Q92681 617 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 THAP11Q96EK4 314 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 APIPQ96GX9 242 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 AHSPQ9NZD4 102 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 POMT2Q9UKY4 750 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 RUVBL1Q9Y265 456 aaKnown RBP13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 POLR3HQ9Y535 204 aaPredicted RBP13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 AP1M2Q9Y6Q5 423 aa13.63□□□□□ -0.23
CLTCL1-212ENST00000622493 LOC100653049A0A140TA62 436 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 PATE3B3GLJ2 98 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 HAT1O14929 419 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 LCMT2O60294 686 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 PCDHGA12O60330 932 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 SLC22A3O75751 556 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 KRT34O76011 436 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 MYO1DO94832 1006 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 SEMA3DO95025 777 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 ETHE1O95571 254 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 TGFB1P01137 390 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 PROS1P07225 676 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 G6PDP11413 515 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 MAGP20916 626 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 TBL3Q12788 808 aaKnown RBP13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 STX5Q13190 355 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 AGKQ53H12 422 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 DEPDC1Q5TB30 811 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 NOXRED1Q6NXP6 359 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 GALNT18Q6P9A2 607 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 PAOXQ6QHF9 649 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 VN1R5Q7Z5H4 357 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 FAM20CQ8IXL6 584 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 SLC35F3Q8IY50 421 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 FAM181AQ8N9Y4 354 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 MFSD9Q8NBP5 474 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 CENPKQ9BS16 269 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 SLC25A23Q9BV35 468 aa13.62□□□□□ -0.23
CLTCL1-212ENST00000622493 MS4A8Q9BY19 250 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms