RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ARMCX4Q5H9R4 360 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ARMC4Q5T2S8 1044 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 SLC2A7Q6PXP3 512 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PARS2Q7L3T8 475 aaKnown RBP8.95□□□□□ -0.98
GGA3-223ENST00000621870 CEP97Q8IW35 865 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PHOSPHO1Q8TCT1 267 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 RAB8BQ92930 207 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 LRRC3Q9BY71 257 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 TPK1Q9H3S4 243 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 MVB12BQ9H7P6 319 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 FBRSQ9HAH7 460 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 MCCC2Q9HCC0 563 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 FZD4Q9ULV1 537 aa8.95□□□□□ -0.98
GGA3-223ENST00000621870 PRSS51A0A1B0GVH4 220 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 GADD45GO95257 159 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 APBB3O95704 486 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 BCHEP06276 602 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 MTHFD1P11586 935 aaKnown RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 AK4P27144 223 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 DSTNP60981 165 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 BNIP1Q12981 228 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 GANABQ14697 944 aaKnown RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 DEFB133Q30KQ1 61 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 SPANXN2Q5MJ10 180 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 LIPIQ6XZB0 460 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PIANPQ8IYJ0 282 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 CBR4Q8N4T8 237 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 GPR26Q8NDV2 337 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PIK3C3Q8NEB9 887 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 OR10Q1Q8NGQ4 319 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PIGXQ8TBF5 258 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ROPN1LQ96C74 230 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 F2RL3Q96RI0 385 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 CHID1Q9BWS9 393 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 SCML1Q9UN30 329 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 CFL2Q9Y281 166 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 MYH7P12883 1935 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 COL18A1P39060 1754 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PRORSD1PA6NEY8 169 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ELOA3DA6NLF2 546 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 STX16-NPEPL1H3BU86 382 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 STX16O14662 325 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 TLX3O43711 291 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 MED26O95402 600 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 F11P03951 625 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 SLC35E2BP0CK96 405 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 HOXC12P31275 282 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PBX2P40425 430 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 RABIFP47224 123 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PCYT1AP49585 367 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 RAB28P51157 221 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 CDKN2DP55273 166 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 TOP3AQ13472 1001 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 ENPP2Q13822 863 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 DOC2AQ14183 400 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ADGRE1Q14246 886 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ELOA3BQ3SY89 546 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 RAB41Q5JT25 222 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ZNF678Q5SXM1 525 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PDZK1Q5T2W1 519 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 C1orf189Q5VU69 101 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 SLC30A6Q6NXT4 461 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 DUS1LQ6P1R4 473 aaKnown RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 ZC3H14Q6PJT7 736 aaKnown RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 RPTNQ6XPR3 784 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 RINLQ6ZS11 566 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 CDHR3Q6ZTQ4 885 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ARHGAP12Q8IWW6 846 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ELOA3Q8NG57 546 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 MYDGFQ969H8 173 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ZNF689Q96CS4 500 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 PKP4Q99569 1192 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 OLFM1Q99784 485 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 RACGAP1Q9H0H5 632 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 TPT1P8Q9HAU6 139 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 C19orf25Q9UFG5 118 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 RIIAD1A6NNX1 92 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 OR5F1O95221 314 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 HEXBP07686 556 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 DBTP11182 482 aaKnown RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 IL4RP24394 825 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ITGA1P56199 1179 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 RHAGQ02094 409 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 MGAT3Q09327 533 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ZNF763Q0D2J5 394 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PCLAFQ15004 111 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ZNF789Q5FWF6 425 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 ZNF57Q68EA5 555 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 FAM180AQ6UWF9 173 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 LNX2Q8N448 690 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 DDHD1Q8NEL9 900 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 TSPAN14Q8NG11 270 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 NEK7Q8TDX7 302 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 GRHL3Q8TE85 626 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 TMEM125Q96AQ2 219 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PLEKHG4BQ96PX9 1271 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms