RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 MMABQ96EY8 250 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 CCDC77Q9BR77 488 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 CRB3Q9BUF7 120 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 PCBD2Q9H0N5 130 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 SMYD2Q9NRG4 433 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 SEMA3GQ9NS98 782 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 ARL15Q9NXU5 204 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 LUZP4Q9P127 313 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 C5AR2Q9P296 337 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 CDC14AQ9UNH5 594 aa17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 MRPS2Q9Y399 296 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-213ENST00000621748 KCNE1BA0A087WTH5 132 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 TXNDC9O14530 226 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 LCMT2O60294 686 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 CD97P48960 835 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 TAS2R39P59534 338 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 VSNL1P62760 191 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 ILF2Q12905 390 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 AIMP2Q13155 320 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 ZNF460Q14592 562 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 SLC6A19Q695T7 634 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 LCTLQ6UWM7 567 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 SLC26A11Q86WA9 606 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 C17orf64Q86WR6 236 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 RELL1Q8IUW5 271 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 OR11G2Q8NGC1 345 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 PYCR2Q96C36 320 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 MACROD1Q9BQ69 325 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 MCMBPQ9BTE3 642 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 YIPF2Q9BWQ6 316 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 DRC3Q9H069 523 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 ZBTB20Q9HC78 741 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 TRPC4Q9UBN4 977 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 C3orf18Q9UK00 162 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 IKBKGQ9Y6K9 419 aa17.06■□□□□ 0.32
SCAMP4-213ENST00000621748 DOPEY2Q9Y3R5 2298 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 FAM95CA0A1B0GW59 222 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 FEZF1A0PJY2 475 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 CDH1P12830 882 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 ZNF37AP17032 561 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 CCND1P24385 295 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 ITGA3P26006 1051 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 SSTR1P30872 391 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 AP1S2P56377 157 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 RPS15AP62244 130 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 FAM53BQ14153 422 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 SYT16Q17RD7 645 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 EMBQ6PCB8 327 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 SBSNQ6UWP8 590 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 PARP9Q8IXQ6 854 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 GSPT2Q8IYD1 628 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 SHISA5Q8N114 240 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 OR56A3Q8NH54 315 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 CPT1CQ8TCG5 803 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 OR4K3Q96R72 315 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 TRIM54Q9BYV2 358 aa17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 ARGLU1Q9NWB6 273 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-213ENST00000621748 A0A087WUV0 522 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 CXorf49A8MYA2 514 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 CDC7O00311 574 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 ACSL3O95573 720 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 GUCA1CO95843 209 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 ALPPP05187 535 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 BCL6P41182 706 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 EMP2P54851 167 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 MAT1AQ00266 395 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 Q0VFX4 171 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 PLEKHN1Q494U1 663 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 PRR30Q53SZ7 412 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 ATG9BQ674R7 924 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 CAPN13Q6MZZ7 669 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 IGFL3Q6UXB1 125 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 CEP97Q8IW35 865 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 CTAGE3PQ8IX95 158 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 OR9A4Q8NGU2 314 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 ANKRD49Q8WVL7 239 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 UBLCP1Q8WVY7 318 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 PNPLA2Q96AD5 504 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 C8orf44Q96CB5 159 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 FBXL8Q96CD0 374 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 TM4SF19Q96DZ7 209 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 THAP11Q96EK4 314 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 TGIF2Q9GZN2 237 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 CDC42EP4Q9H3Q1 356 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 RHOJQ9H4E5 214 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 NINJ2Q9NZG7 142 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 MAP4K5Q9Y4K4 846 aa17.04■□□□□ 0.32
SCAMP4-213ENST00000621748 HECTD1Q9ULT8 2610 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 IDSB3KWA1 339 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 ANXA5P08758 320 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 ECHS1P30084 290 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 INPP5JQ15735 1006 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 NDUFA9Q16795 377 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms