RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PCDH7O60245 1069 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 LILRB5O75023 590 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 FGF4P08620 206 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 BCKDHBP21953 392 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 DHPSP49366 369 aaPredicted RBP10.13□□□□□ -0.79
VPS11-208ENST00000621676 GSK3BP49841 420 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 ACTR3P61158 418 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 LRP8Q14114 963 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 BLOC1S3Q6QNY0 202 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 DHFR2Q86XF0 187 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 TICAM1Q8IUC6 712 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 TP53I13Q8NBR0 393 aaPredicted RBP10.13□□□□□ -0.79
VPS11-208ENST00000621676 OR52J3Q8NH60 311 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 MAELQ96JY0 434 aaKnown RBP10.13□□□□□ -0.79
VPS11-208ENST00000621676 CCDC28BQ9BUN5 200 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SRMSQ9H3Y6 488 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 DCLRE1BQ9H816 532 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 RTTNQ86VV8 2226 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 LRRC72A6NJI9 287 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 NPC1O15118 1278 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 HCRTR1O43613 425 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 WFS1O76024 890 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 VIPP01282 170 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 EBLN1P0CF75 366 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 PIM1P11309 404 aaPredicted RBP10.13□□□□□ -0.79
VPS11-208ENST00000621676 GLULP15104 373 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 JUNDP17535 347 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 OR1E2P47887 323 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 TP53BP2Q13625 1128 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 DEFB134Q4QY38 66 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 TBCELQ5QJ74 424 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 MED27Q6P2C8 311 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 GPR180Q86V85 440 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 HM13Q8TCT9 377 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SLC13A3Q8WWT9 602 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SLC5A11Q8WWX8 675 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 OR52A5Q9H2C5 316 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 TRIT1Q9H3H1 467 aaKnown RBP10.13□□□□□ -0.79
VPS11-208ENST00000621676 SDR39U1Q9NRG7 319 aaPredicted RBP10.13□□□□□ -0.79
VPS11-208ENST00000621676 PCDHB14Q9Y5E9 798 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 hCG_2039718K7EN88 272 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 GNGT2O14610 69 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 KMOO15229 486 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 MATN4O95460 622 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ATP6V1B1P15313 513 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 CCND1P24385 295 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 MRPS35P82673 323 aaKnown RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 PLOD1Q02809 727 aaPredicted RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 BNIP3Q12983 259 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 CBLBQ13191 982 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 CCINQ13939 588 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZNF423Q2M1K9 1284 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 SFT2D3Q587I9 215 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 CCNYL2Q5T2Q4 361 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 C6orf52Q5T4I8 152 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 COMMD6Q7Z4G1 85 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZC3H7AQ8IWR0 971 aaKnown RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS11-208ENST00000621676 LILRA2Q8N149 483 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 TMEM132CQ8N3T6 1108 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ANKRD53Q8N9V6 530 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 CAMK1GQ96NX5 476 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZNF451Q9Y4E5 1061 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 IL3P08700 152 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 AMD1P17707 334 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 SSR2P43308 183 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 MTTPP55157 894 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 SLC34A1Q06495 639 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 NNATQ16517 81 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 PYCR3Q53H96 274 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZC3H14Q6PJT7 736 aaKnown RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 SHISA6Q6ZSJ9 500 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 PRSS41Q7RTY9 318 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 GALNT7Q86SF2 657 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZBTB46Q86UZ6 589 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 MEX3DQ86XN8 651 aaKnown RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 PGAM4Q8N0Y7 254 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 PARP8Q8N3A8 854 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 SIMC1Q8NDZ2 872 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 FAM162AQ96A26 154 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 MAGEB10Q96LZ2 347 aaPredicted RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 HDAC8Q9BY41 377 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 TRPV4Q9HBA0 871 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 HRASLS2Q9NWW9 162 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 PADI4Q9UM07 663 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 CCDC88CQ9P219 2028 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 GABRR3A8MPY1 467 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 PSIP1O75475 530 aaKnown RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 C6orf47O95873 294 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 DRD1P21728 446 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 SRP54P61011 504 aaKnown RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 ILF3Q12906 894 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS11-208ENST00000621676 HIST2H2ACQ16777 129 aaPredicted RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 ALG11Q2TAA5 492 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 MFSD4BQ5TF39 518 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZDHHC20Q5W0Z9 365 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 HIST2H2AA3Q6FI13 130 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 GLYATQ6IB77 296 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 SLC22A18ASQ8N1D0 253 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 DNAJC9Q8WXX5 260 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms