RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HIST1H2AHQ96KK5 128 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 AGAP4Q96P64 663 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 OR4K3Q96R72 315 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 HIST1H2AJQ99878 128 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 H2AFJQ9BTM1 129 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 C14orf105Q9NVL8 296 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 ASF1BQ9NVP2 202 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 MOCS1Q9NZB8 636 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 ZFATQ9P243 1243 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 COL12A1Q99715 3063 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 RP1L1Q8IWN7 2480 aaPredicted RBP16.27■□□□□ 0.2
HMGN3-203ENST00000620514 PIAS1O75925 651 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 GUCA1CO95843 209 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 HEXBP07686 556 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 IL1RNP18510 177 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 MEF2AQ02078 507 aaPredicted RBP16.27■□□□□ 0.2
HMGN3-203ENST00000620514 ZNF460Q14592 562 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 CRB2Q5IJ48 1285 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 DUPD1Q68J44 220 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 CAPN13Q6MZZ7 669 aaPredicted RBP16.27■□□□□ 0.2
HMGN3-203ENST00000620514 IGFL2Q6UWQ7 119 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 CAPN12Q6ZSI9 719 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 STRA8Q7Z7C7 330 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 ZC3HC1Q86WB0 502 aaKnown RBP16.27■□□□□ 0.2
HMGN3-203ENST00000620514 OR56A3Q8NH54 315 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 ZCCHC10Q8TBK6 192 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 FBXL8Q96CD0 374 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 TM4SF19Q96DZ7 209 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 THAP11Q96EK4 314 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 WDR77Q9BQA1 342 aaPredicted RBP16.27■□□□□ 0.2
HMGN3-203ENST00000620514 TGIF2Q9GZN2 237 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 DPH5Q9H2P9 285 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 RNF14Q9UBS8 474 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 NTNG1Q9Y2I2 539 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 PCDHGA10Q9Y5H3 936 aa16.27■□□□□ 0.2
HMGN3-203ENST00000620514 USP9XQ93008 2570 aaPredicted RBP16.27■□□□□ 0.19
HMGN3-203ENST00000620514 NSG1A0A0A6YYJ2 146 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 FAM95CA0A1B0GW59 222 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 KLHL18O94889 574 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 CELA2AP08217 269 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 CCND1P24385 295 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 CXCR2P25025 360 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 AVPR1BP47901 424 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 GLRBP48167 497 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 AP1S2P56377 157 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 TAS2R39P59534 338 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 TMEM214Q6NUQ4 689 aaKnown RBP16.26■□□□□ 0.19
HMGN3-203ENST00000620514 SBSNQ6UWP8 590 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 LINC00696Q6ZRV3 163 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 NDUFAF7Q7L592 441 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 ASPGQ86U10 573 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 SLC26A11Q86WA9 606 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 ZBED8Q8IZ13 594 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 MFSD9Q8NBP5 474 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 KCT2Q8NC54 265 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 PPP4R1Q8TF05 950 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 PDLIM5Q96HC4 596 aaKnown RBP16.26■□□□□ 0.19
HMGN3-203ENST00000620514 TRIM54Q9BYV2 358 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 SMYD2Q9NRG4 433 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 HCN3Q9P1Z3 774 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 MKL2Q9ULH7 1088 aa16.26■□□□□ 0.19
HMGN3-203ENST00000620514 NOVA2Q9UNW9 492 aaKnown RBP16.26■□□□□ 0.19
HMGN3-203ENST00000620514 IGHV1-45A0A0A0MS14 117 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 A0A1W2PQ72 361 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 BLACEA4D250 179 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 PABPN1LA6NDY0 278 aaKnown RBP16.25■□□□□ 0.19
HMGN3-203ENST00000620514 SGK494L7N484 410 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 CDC7O00311 574 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 BMP10O95393 424 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 NSA2O95478 260 aaKnown RBP16.25■□□□□ 0.19
HMGN3-203ENST00000620514 ZNF37AP17032 561 aaPredicted RBP16.25■□□□□ 0.19
HMGN3-203ENST00000620514 C2orf54Q08AI8 447 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 NR6A1Q15406 480 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 EIF2S3LQ2VIR3 472 aaKnown RBP16.25■□□□□ 0.19
HMGN3-203ENST00000620514 CATSPEREQ5SY80 951 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 FHL5Q5TD97 284 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 ISLR2Q6UXK2 745 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 PDSS2Q86YH6 399 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 KBTBD2Q8IY47 623 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 CAMKVQ8NCB2 501 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 ZNF740Q8NDX6 193 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 SPATA4Q8NEY3 305 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 ABHD11Q8NFV4 315 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 DNAJB14Q8TBM8 379 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 SLC13A3Q8WWT9 602 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 PSMF1Q92530 271 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 CNDP1Q96KN2 507 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 HAUS8Q9BT25 410 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 SLC29A3Q9BZD2 475 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 SPNS1Q9H2V7 528 aa16.25■□□□□ 0.19
HMGN3-203ENST00000620514 ESPL1Q14674 2120 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 LOC102723996A0A087X1L8 192 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 NPEPPSL1A6NEC2 478 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 OR2W5A6NFC9 320 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 H0YIG0 161 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 RAD51CO43502 376 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 SEMA7AO75326 666 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 ENO2P09104 434 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-203ENST00000620514 PRR35P0CG20 571 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 VARSP26640 1264 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms