RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TSC22D4Q9Y3Q8 395 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 TIMM22Q9Y584 194 aa10.99□□□□□ -0.65
SLIRP-212ENST00000613856 MDC1Q14676 2089 aaKnown RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 PIPSLA2A3N6 862 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 NPIPB8E9PQR5 432 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 ERVH48-1M5A8F1 160 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 MANBAO00462 879 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 BTN3A3O00478 584 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 NUDT21O43809 227 aaKnown RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 DIAPH2O60879 1101 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 VPS4BO75351 444 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 CDH1P12830 882 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 PSMB5P28074 263 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 CMPK1P30085 196 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 HTR6P50406 440 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 CCR8P51685 355 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 REEP5Q00765 189 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 NR1D2Q14995 579 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 NAA25Q14CX7 972 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 ZRSR2Q15696 482 aaKnown RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 SLC5A12Q1EHB4 618 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 KIF26BQ2KJY2 2108 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 SLC9B1Q4ZJI4 515 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 VWA5B1Q5TIE3 1220 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 FRG2Q64ET8 278 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 ZCCHC8Q6NZY4 707 aaKnown RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 ACAD11Q709F0 780 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 OOSP2Q86WS3 158 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 MYLK4Q86YV6 388 aaPredicted RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 SLC35F3Q8IY50 421 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 LAS2Q8IYD9 372 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 C2orf73Q8N5S3 287 aaPredicted RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 OR2L3Q8NG85 312 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 OR4E2Q8NGC2 313 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 OR4K1Q8NGD4 311 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 OR4C6Q8NH72 309 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 FLVCR1-AS1Q8TAF5 88 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 WDR20Q8TBZ3 569 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 JPH3Q8WXH2 748 aaPredicted RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 TTC9Q92623 222 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 UBE2E3Q969T4 207 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 REPS1Q96D71 796 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 FRG2BQ96QU4 278 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 EPB41L1Q9H4G0 881 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 NT5DC2Q9H857 520 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 TCF7L2Q9NQB0 619 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 ABCF3Q9NUQ8 709 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 GEMIN8Q9NWZ8 242 aaKnown RBP10.98□□□□□ -0.65
SLIRP-212ENST00000613856 SPHK1Q9NYA1 384 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 ANKMY1Q9P2S6 941 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 PCDHGA11Q9Y5H2 935 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 KLK4Q9Y5K2 254 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 BOD1L1Q8NFC6 3051 aa10.98□□□□□ -0.65
SLIRP-212ENST00000613856 OR5K3A6NET4 321 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 C2orf74A8MZ97 194 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 B8ZZF3 427 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 PPM1DO15297 605 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 ULK1O75385 1050 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 DCTN3O75935 186 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 PRR35P0CG20 571 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 MYF5P13349 255 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 HSD3B1P14060 373 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 UGT2B7P16662 529 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CXCR2P25025 360 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 HSD3B2P26439 372 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 VARSP26640 1264 aaKnown RBP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 EPHA3P29320 983 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 SERPINB3P29508 390 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 SERPINB1P30740 379 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CAPZBP47756 277 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 SF3A3Q12874 501 aaKnown RBP eCLIP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CSTF3Q12996 717 aaKnown RBP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 IFT88Q13099 833 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 SLBPQ14493 270 aaKnown RBP eCLIP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CPSF6Q16630 551 aaKnown RBP eCLIP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 HIST2H2ACQ16777 129 aaPredicted RBP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 TCHHL1Q5QJ38 904 aaPredicted RBP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CATSPEREQ5SY80 951 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 KIAA1614Q5VZ46 1190 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 METTL21CQ5VZV1 264 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 HIST2H2AA3Q6FI13 130 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 MED27Q6P2C8 311 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 KLHL35Q6PF15 583 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 TRIM46Q7Z4K8 759 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 DDIASQ8IXT1 998 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 KRT78Q8N1N4 520 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 OR6C4Q8NGE1 309 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CEP70Q8NHQ1 597 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 OR2A14Q96R47 310 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 OR52B2Q96RD2 323 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 AIF1LQ9BQI0 150 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 SARGQ9BW04 601 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 ACAT2Q9BWD1 397 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 ELOVL6Q9H5J4 265 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 SLC6A20Q9NP91 592 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 MRPS30Q9NP92 439 aaKnown RBP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 TMEM184CQ9NVA4 438 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 RIC8BQ9NVN3 520 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 CUEDC1Q9NWM3 386 aaPredicted RBP10.97□□□□□ -0.65
SLIRP-212ENST00000613856 ACTR10Q9NZ32 417 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms