RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 KCNMB4Q86W47 210 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 ACVR1CQ8NER5 493 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 STYXQ8WUJ0 223 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 TMEM237Q96Q45 408 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 GPR21Q99679 349 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PCED1AQ9H1Q7 454 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 LRRN3Q9H3W5 708 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SRMSQ9H3Y6 488 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SLCO1B3Q9NPD5 702 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 KLHL14Q9P2G3 628 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SLC39A10Q9ULF5 831 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SLC17A4Q9Y2C5 497 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 LOXL2Q9Y4K0 774 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 LRRC42Q9Y546 428 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 U3KQA8 63 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PTPN13Q12923 2485 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 GOLGA8RI6L899 631 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 BTN3A3O00478 584 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 LIN7AO14910 233 aaPredicted RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PRPF4O43172 522 aaKnown RBP eCLIP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SPAG7O75391 227 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PRB1P04280 392 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PROS1P07225 676 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 HOXC12P31275 282 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 CCR7P32248 378 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 GRK3P35626 688 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 MAGEA4P43358 317 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SLC18A1P54219 525 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SESN3P58005 492 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 RPL26P61254 145 aaKnown RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 CXADRP78310 365 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 MEF2AQ02078 507 aaPredicted RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 CACNG1Q06432 222 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 GPR19Q15760 415 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SLCO4C1Q6ZQN7 724 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SPRED1Q7Z699 444 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 TDRPQ86YL5 185 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SYTL1Q8IYJ3 562 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 FSTL5Q8N475 847 aaPredicted RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 TSPEARQ8WU66 669 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 C10orf82Q8WW14 230 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 OR6C1Q96RD1 312 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 PITPNM3Q9BZ71 974 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 TRABDQ9H4I3 376 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 AKIRIN1Q9H9L7 192 aaPredicted RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 NLE1Q9NVX2 485 aaPredicted RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 ADAM30Q9UKF2 790 aa4.79□□□□□ -1.64
SYCP1-209ENST00000613524 RPL26L1Q9UNX3 145 aaKnown RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
SYCP1-209ENST00000613524 EME2A4GXA9 379 aaPredicted RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 SLC9B1P1A6NJY1 282 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ZNF487B1APH4 448 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 PSMD11O00231 422 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 DNALI1O14645 258 aaPredicted RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 TYROBPO43914 113 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 EDF1O60869 148 aaKnown RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 CPNE6O95741 557 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 LINGO3P0C6S8 592 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 OR56A5P0C7T3 313 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 TPBGLP0DKB5 382 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 GLB1P16278 677 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 CSRP1P21291 193 aaKnown RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 SDHBP21912 280 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 TACR1P25103 407 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 PTPN7P35236 360 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RPA3P35244 121 aaPredicted RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 THBS2P35442 1172 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RXRGP48443 463 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 DUSP3P51452 185 aaPredicted RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 INHBCP55103 352 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ARL4CP56559 192 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 KIAA1024LP59773 190 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RPS18P62269 152 aaKnown RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 SLC14A1Q13336 389 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 KCNJ11Q14654 390 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 TMED2Q15363 201 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RPE65Q16518 533 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 PDK4Q16654 411 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ISXQ2M1V0 245 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ACSBG2Q5FVE4 666 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RNFT1Q5M7Z0 435 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 LDLRAP1Q5SW96 308 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 MROH9Q5TGP6 573 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 MRNIPQ6NTE8 343 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ZNF449Q6P9G9 518 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 IYDQ6PHW0 289 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 AFTPHQ6ULP2 937 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 CMC1Q7Z7K0 106 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RIBC1Q8N443 379 aaPredicted RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ENDOVQ8N8Q3 282 aaKnown RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 ZNF527Q8NB42 609 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 AVL9Q8NBF6 648 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 VRK1Q99986 396 aaPredicted RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 IL22Q9GZX6 179 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 COG4Q9H9E3 785 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 RNPEPL1Q9HAU8 725 aa4.78□□□□□ -1.64
SYCP1-209ENST00000613524 TRNAU1APQ9NX07 287 aaKnown RBP4.78□□□□□ -1.64
SYCP1-209ENST00000613524 SPHK1Q9NYA1 384 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms