RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 DYRK4Q9NR20 520 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 ARL15Q9NXU5 204 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 MTMR11A4FU01 709 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 MYADML2A6NDP7 307 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 SCO2O43819 266 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 MPZL2O60487 215 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 SLITRK5O94991 958 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 CD160O95971 181 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 SLC6A12P48065 614 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 RPIAP49247 311 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 GPR17Q13304 367 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 UGT8Q16880 541 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 FAM26DQ5JW98 314 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 RASAL3Q86YV0 1011 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 PIH1D2Q8WWB5 315 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 OVCA2Q8WZ82 227 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 APOLD1Q96LR9 279 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 ZFYVE1Q9HBF4 777 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 QPCTLQ9NXS2 382 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 CRLS1Q9UJA2 301 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 BTBD3Q9Y2F9 522 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 N6AMT1Q9Y5N5 214 aa21.62■■□□□ 1.05
SHANK2-220ENST00000608988 LRATO95237 230 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 OR1G1P47890 313 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 RHOAP61586 193 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 ATAD3CQ5T2N8 411 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 FRG2Q64ET8 278 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.61■■□□□ 1.05
SHANK2-220ENST00000608988 RNF130Q86XS8 419 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 CELF2-AS1Q8N7Q2 184 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 FBXO22Q8NEZ5 403 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 OR10G2Q8NGC3 310 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 TPD52L3Q96J77 140 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 FRG2BQ96QU4 278 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 FEVQ99581 238 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 CHCHD6Q9BRQ6 235 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 TTPALQ9BTX7 342 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 CENPOQ9BU64 300 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 TPT1P8Q9HAU6 139 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 ZNF226Q9NYT6 803 aa21.61■■□□□ 1.05
SHANK2-220ENST00000608988 SLC38A8A6NNN8 435 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 UGDHO60701 494 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 B3GALT4O96024 378 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 PTHP01270 115 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 STSP08842 583 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 COX7A2P14406 83 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 ST3GAL4Q11206 333 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 PPIGQ13427 754 aaKnown RBP eCLIP21.6■■□□□ 1.051e-7■■□□□ 14.1
SHANK2-220ENST00000608988 PTPRRQ15256 657 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 CXorf57Q6NSI4 855 aaKnown RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 TMC5Q6UXY8 1006 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 GDPGP1Q6ZNW5 385 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 NXPE1Q8N323 547 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 OR4C15Q8NGM1 316 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 TRNT1Q96Q11 434 aaKnown RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 SEPT5Q99719 369 aaPredicted RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 SLC12A9Q9BXP2 914 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 IL26Q9NPH9 171 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 TRMT13Q9NUP7 481 aaKnown RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 RUVBL1Q9Y265 456 aaKnown RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 GLYATL1P3A0A0U1RQE8 302 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 SLC16A5O15375 505 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 KIAA0513O60268 411 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 RPS5P46782 204 aaKnown RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 PCDH1Q08174 1060 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 SP140Q13342 867 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 GPR50Q13585 617 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 ANXA8L1Q5VT79 327 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 CXCL17Q6UXB2 119 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 CLDN19Q8N6F1 224 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 Q8N9G6 341 aaPredicted RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 ASCC1Q8N9N2 400 aaKnown RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 C11orf65Q8NCR3 313 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 CCDC97Q96F63 343 aaPredicted RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 Q96MT0 163 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 SDHCQ99643 169 aaPredicted RBP21.6■■□□□ 1.05
SHANK2-220ENST00000608988 IMPAD1Q9NX62 359 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 GPR83Q9NYM4 423 aa21.6■■□□□ 1.05
SHANK2-220ENST00000608988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.59■■□□□ 1.05
SHANK2-220ENST00000608988 CCRL2O00421 344 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 PRAMEF12O95522 483 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 COL6A1P12109 1028 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 ITGA2P17301 1181 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 SPAM1P38567 509 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 NSG1P42857 185 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 SELENOWP63302 87 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 MICAQ29983 383 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 CAMKMTQ7Z624 323 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 NLRP8Q86W28 1048 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 DENND1CQ8IV53 801 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 SLC5A8Q8N695 610 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 VPS37AQ8NEZ2 397 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 EGLN2Q96KS0 407 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 THSD1Q9NS62 852 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 DNAJC11Q9NVH1 559 aa21.59■■□□□ 1.05
SHANK2-220ENST00000608988 HOXC11O43248 304 aaPredicted RBP21.58■■□□□ 1.05
SHANK2-220ENST00000608988 MPC1LP0DKB6 136 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 PIPP12273 146 aaPredicted RBP21.58■■□□□ 1.05
SHANK2-220ENST00000608988 JUPP14923 745 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 CA5AP35218 305 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms