RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CHCHD5Q9BSY4 110 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 PI4K2AQ9BTU6 479 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 SDCBP2Q9H190 292 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 RIMS4Q9H426 269 aaPredicted RBP3.54□□□□□ -1.84
HDDC2-207ENST00000608532 RNF121Q9H920 327 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 GNB4Q9HAV0 340 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 TBC1D13Q9NVG8 400 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 NLGN3Q9NZ94 848 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 BCCIPQ9P287 314 aaKnown RBP eCLIP3.54□□□□□ -1.84
HDDC2-207ENST00000608532 CTSZQ9UBR2 303 aa3.54□□□□□ -1.84
HDDC2-207ENST00000608532 IGHV4-30-2A0A087WSY4 118 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 SRRM5B3KS81 715 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 SHISA9B4DS77 424 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 K7EQD1 137 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 RTCAO00442 366 aaKnown RBP3.53□□□□□ -1.84
HDDC2-207ENST00000608532 CYTIPO60759 359 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 AZU1P20160 251 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 ACHEP22303 614 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 LIMK1P53667 647 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 CLDN15P56746 228 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 AIMP1Q12904 312 aaKnown RBP3.53□□□□□ -1.84
HDDC2-207ENST00000608532 CRY2Q49AN0 593 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 LACTB2Q53H82 288 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-207ENST00000608532 MFSD4BQ5TF39 518 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 BRINP3Q76B58 766 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 OR4N5Q8IXE1 308 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 FBXL16Q8N461 479 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 CCDC63Q8NA47 563 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 KCTD6Q8NC69 237 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 TOMM40LQ969M1 308 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 PYCR2Q96C36 320 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 NEDD4LQ96PU5 975 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 NDNQ99608 321 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 SLF1Q9BQI6 1058 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 SNX25Q9H3E2 840 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 TUBB1Q9H4B7 451 aa3.53□□□□□ -1.84
HDDC2-207ENST00000608532 THAP10Q9P2Z0 257 aaPredicted RBP3.53□□□□□ -1.84
HDDC2-207ENST00000608532 IGLV3-10A0A075B6K4 115 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 GLTPD2A6NH11 291 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 SNAP91O60641 907 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 HOXD4P09016 255 aaPredicted RBP3.52□□□□□ -1.85
HDDC2-207ENST00000608532 MYBL1P10243 752 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 HSD17B3P37058 310 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 ETV5P41161 510 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 DLK1P80370 383 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 CALD1Q05682 793 aaKnown RBP3.52□□□□□ -1.85
HDDC2-207ENST00000608532 PTGISQ16647 500 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 OR6J1Q8NGC5 347 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 GTPBP2Q9BX10 602 aaKnown RBP3.52□□□□□ -1.85
HDDC2-207ENST00000608532 DNAI2Q9GZS0 605 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 PARLQ9H300 379 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 ACTL8Q9H568 366 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 RAVER2Q9HCJ3 691 aaKnown RBP3.52□□□□□ -1.85
HDDC2-207ENST00000608532 PRR34Q9NV39 138 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 WDR35Q9P2L0 1181 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 STYXL1Q9Y6J8 313 aa3.52□□□□□ -1.85
HDDC2-207ENST00000608532 MTMR11A4FU01 709 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 SYNDIG1LA6NDD5 238 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 URADA6NGE7 173 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 LRCH4O75427 683 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 F3P13726 295 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 IL4RP24394 825 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 CACNG1Q06432 222 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 DUSP5Q16690 384 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 RBPMS2Q6ZRY4 209 aaKnown RBP3.51□□□□□ -1.85
HDDC2-207ENST00000608532 TIPARPQ7Z3E1 657 aaKnown RBP3.51□□□□□ -1.85
HDDC2-207ENST00000608532 PIGWQ7Z7B1 504 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 XXYLT1Q8NBI6 393 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 OR10G7Q8NGN6 311 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 RPLP0P6Q8NHW5 317 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 CHURC1Q8WUH1 139 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 PGAP3Q96FM1 320 aaPredicted RBP3.51□□□□□ -1.85
HDDC2-207ENST00000608532 UBAC1Q9BSL1 405 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 GTSE1Q9NYZ3 720 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 PKD2L2Q9NZM6 624 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 POMT2Q9UKY4 750 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 PLCL2Q9UPR0 1127 aa3.51□□□□□ -1.85
HDDC2-207ENST00000608532 NPHP3Q7Z494 1330 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 IGLV4-3A0A075B6K6 122 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 SERINC4A6NH21 518 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 C17orf105B2RV13 164 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 BCL2L11O43521 198 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 TLX2O43763 284 aaPredicted RBP3.5□□□□□ -1.85
HDDC2-207ENST00000608532 ECE2O60344 883 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 RPLP0P05388 317 aaKnown RBP3.5□□□□□ -1.85
HDDC2-207ENST00000608532 ADRB2P07550 413 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 FOLR2P14207 255 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 HSPA4P34932 840 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 MTCP1P56278 107 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 MZT1Q08AG7 82 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 SRSF9Q13242 221 aaKnown RBP eCLIP3.5□□□□□ -1.85
HDDC2-207ENST00000608532 RBBP7Q16576 425 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 CST9LP1Q5W188 147 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 TTC27Q6P3X3 843 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 C3P1Q6ZMU1 363 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 RNF130Q86XS8 419 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 MAML2Q8IZL2 1156 aaPredicted RBP3.5□□□□□ -1.85
HDDC2-207ENST00000608532 PI4KAP1Q8N8J0 262 aa3.5□□□□□ -1.85
HDDC2-207ENST00000608532 ZPLD1Q8TCW7 415 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms