RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TBC1D19Q8N5T2 526 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 C1orf52Q8N6N3 182 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 TTLQ8NG68 377 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 CLPTM1LQ96KA5 538 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 CLMPQ9H6B4 373 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 DOLKQ9UPQ8 538 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 FEZF1A0PJY2 475 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 OR1F1O43749 312 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 CIB2O75838 187 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 IL6P05231 212 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 PSME3P61289 254 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 WASHC2DQ5SRD0 308 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 GALNT18Q6P9A2 607 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 BNC2Q6ZN30 1099 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 FBXW8Q8N3Y1 598 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 ANKRD53Q8N9V6 530 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 VPS33AQ96AX1 596 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 CDRT15Q96T59 188 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 HOPXQ9BPY8 73 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 DPH7Q9BTV6 452 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 OR51B5Q9H339 312 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 SLC6A20Q9NP91 592 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 AHSPQ9NZD4 102 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 C15orf41Q9Y2V0 281 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 PCDHGA7Q9Y5G6 932 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 ENTPD2Q9Y5L3 495 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 TMEM221A6NGB7 291 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 M0R296 226 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 PRMT3O60678 531 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 NPPAP01160 153 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 TACR1P25103 407 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 GSTM2P28161 218 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 CSTF1Q05048 431 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 KIAA1614Q5VZ46 1190 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 LYSMD4Q5XG99 296 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 C8orf82Q6P1X6 216 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 FBXL6Q8N531 539 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 GAB3Q8WWW8 586 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 TSSK3Q96PN8 268 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 SARGQ9BW04 601 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 SLC7A8Q9UHI5 535 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 PCM1Q15154 2024 aa16.93■□□□□ 0.3
SHKBP1-224ENST00000600718 EML5Q05BV3 1969 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 TRIOO75962 3097 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 OR6C74A6NCV1 312 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 ASPDHA6ND91 283 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 B4DGG1 531 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 YY2O15391 372 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 AQP9O43315 295 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 PRPS1L1P21108 318 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 MTTPP55157 894 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 RAE1P78406 368 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 HHEXQ03014 270 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 TIGD2Q4W5G0 525 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 DEPDC1Q5TB30 811 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 C6orf163Q5TEZ5 329 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 ZNF425Q6IV72 752 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 PRMT9Q6P2P2 845 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 TMEM26Q6ZUK4 368 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 NET1Q7Z628 596 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 FAM20CQ8IXL6 584 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 METTL4Q8N3J2 472 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 MINDY1Q8N5J2 469 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 KRTCAP2Q8N6L1 136 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 CLHC1Q8NHS4 586 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 TESCQ96BS2 214 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 TMEM74Q96NL1 305 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 OR2A14Q96R47 310 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 EBPLQ9BY08 206 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 MS4A8Q9BY19 250 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 DENND2DQ9H6A0 471 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 ERVMER34-1Q9H9K5 563 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 MAPRE3Q9UPY8 281 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 PCDHGA2Q9Y5H1 932 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 FANCMQ8IYD8 2048 aa16.92■□□□□ 0.3
SHKBP1-224ENST00000600718 A0A1B0GTW7 788 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 A8MUI8 341 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 LCMT2O60294 686 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 CLEC3AO75596 197 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 SEMA3DO95025 777 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 FKBP9O95302 570 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 ANXA4P09525 319 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 POLR2CP19387 275 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 TIA1P31483 386 aaKnown RBP eCLIP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 ASMTP46597 345 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 C21orf58P58505 322 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 FOXM1Q08050 763 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 PMS2CLQ68D20 193 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 SFTPA2Q8IWL1 248 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 RIMKLAQ8IXN7 391 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 MAML2Q8IZL2 1156 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 DPP10Q8N608 796 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 GPR156Q8NFN8 814 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 FLVCR1-AS1Q8TAF5 88 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 ACTR10Q9NZ32 417 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 C2orf74A8MZ97 194 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 LMO7DNF2Z398 122 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 RPSAP08865 295 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms