RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 C11orf24Q96F05 449 aaPredicted RBP19.27■□□□□ 0.68
PNKP-214ENST00000600573 APOLD1Q96LR9 279 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 LRGUKQ96M69 825 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 PRM3Q9NNZ6 103 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 DMRT3Q9NQL9 472 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 POT1Q9NUX5 634 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 TMEM184CQ9NVA4 438 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 ICKQ9UPZ9 632 aa19.27■□□□□ 0.68
PNKP-214ENST00000600573 ANKDD1BA6NHY2 528 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 PRICKLE3O43900 615 aaPredicted RBP19.26■□□□□ 0.67
PNKP-214ENST00000600573 ACADSP16219 412 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 GRK3P35626 688 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 DGKQP52824 942 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 ATXN3P54252 364 aaPredicted RBP19.26■□□□□ 0.67
PNKP-214ENST00000600573 RPS13P62277 151 aaKnown RBP19.26■□□□□ 0.67
PNKP-214ENST00000600573 REEP5Q00765 189 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 PWP1Q13610 501 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 DHFR2Q86XF0 187 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 OR2A1Q8NGT9 310 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 LCN9Q8WX39 176 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 PCDHAC1Q9H158 963 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 ZNF624Q9P2J8 865 aaPredicted RBP19.26■□□□□ 0.67
PNKP-214ENST00000600573 PNMA8BQ9ULN7 279 aaPredicted RBP19.26■□□□□ 0.67
PNKP-214ENST00000600573 SH2B3Q9UQQ2 575 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 DLGAP4Q9Y2H0 992 aa19.26■□□□□ 0.67
PNKP-214ENST00000600573 FAM221BA6H8Z2 402 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 CASQ2O14958 399 aaPredicted RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 DNAJA2O60884 412 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SDC1P18827 310 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 CMPK1P30085 196 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SLC19A1P41440 591 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 RPL6Q02878 288 aaKnown RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 FAM174BQ3ZCQ3 159 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SDR16C5Q8N3Y7 309 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 C2orf73Q8N5S3 287 aaPredicted RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 FAM160A2Q8N612 972 aaPredicted RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 FRMD1Q8N878 549 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 CCL4L1Q8NHW4 92 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 ZUFSPQ96AP4 578 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SLC6A18Q96N87 628 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 ACAT2Q9BWD1 397 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 AP3M1Q9Y2T2 418 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 WBP11Q9Y2W2 641 aaKnown RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 PCDHGA2Q9Y5H1 932 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 COL6A3P12111 3177 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 PCM1Q15154 2024 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 A0A1W2PR77 199 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 TCRBV3S1A0A5B6 114 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 MAP3K13O43283 966 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SEMA3DO95025 777 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 KCNH1O95259 989 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 FKBP9O95302 570 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 ATP6V1C1P21283 382 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 HNRNPFP52597 415 aaKnown RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 SRSF11Q05519 484 aaKnown RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 KIR2DS3Q14952 304 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 RBBP5Q15291 538 aaKnown RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 RNF111Q6ZNA4 994 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 TMEM126BQ8IUX1 230 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 TRIM48Q8IWZ4 208 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 KIAA2013Q8IYS2 634 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 DNAJB14Q8TBM8 379 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 ZNF570Q96NI8 536 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SARGQ9BW04 601 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 RMND5AQ9H871 391 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 MRPS30Q9NP92 439 aaKnown RBP19.25■□□□□ 0.67
PNKP-214ENST00000600573 TAAR2Q9P1P5 351 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 SNX7Q9UNH6 387 aa19.25■□□□□ 0.67
PNKP-214ENST00000600573 PRSS51A0A1B0GVH4 220 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 K7ESF4 209 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 VIPP01282 170 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 PGRP06401 933 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 RPL3P39023 403 aaKnown RBP19.24■□□□□ 0.67
PNKP-214ENST00000600573 GSK3BP49841 420 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 ZXDAP98168 799 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 RHDQ02161 417 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 SPANXN4Q5MJ08 99 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 DLEU7Q6UYE1 221 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 SYT12Q8IV01 421 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 KRTCAP2Q8N6L1 136 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 LMNTD1Q8N9Z9 388 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 CLHC1Q8NHS4 586 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 DUS3LQ96G46 650 aaKnown RBP19.24■□□□□ 0.67
PNKP-214ENST00000600573 NAF1Q96HR8 494 aaKnown RBP19.24■□□□□ 0.67
PNKP-214ENST00000600573 PRPF18Q99633 342 aaKnown RBP19.24■□□□□ 0.67
PNKP-214ENST00000600573 CGREF1Q99674 301 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 ZNF184Q99676 751 aaPredicted RBP19.24■□□□□ 0.67
PNKP-214ENST00000600573 KCTD14Q9BQ13 255 aaPredicted RBP19.24■□□□□ 0.67
PNKP-214ENST00000600573 CENPKQ9BS16 269 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 TWSG1Q9GZX9 223 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 SRMSQ9H3Y6 488 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 ALG2Q9H553 416 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 XKR8Q9H6D3 395 aa19.24■□□□□ 0.67
PNKP-214ENST00000600573 TRBC2A0A5B9 178 aa19.23■□□□□ 0.67
PNKP-214ENST00000600573 H7BY64 318 aa19.23■□□□□ 0.67
PNKP-214ENST00000600573 TLR4O00206 839 aa19.23■□□□□ 0.67
PNKP-214ENST00000600573 SCAMP1O15126 338 aa19.23■□□□□ 0.67
PNKP-214ENST00000600573 CSF2P04141 144 aa19.23■□□□□ 0.67
PNKP-214ENST00000600573 ATP6V1B2P21281 511 aa19.23■□□□□ 0.67
PNKP-214ENST00000600573 S100A3P33764 101 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms