RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	DOC2A	Q14183	400 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	TBCC	Q15814	346 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	HIST2H2AC	Q16777	129 aa	Predicted RBP	21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	PAGE2B	Q5JRK9	111 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	CATSPERE	Q5SY80	951 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	HIST2H2AA3	Q6FI13	130 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	ZNF425	Q6IV72	752 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	IGF2-AS	Q6U949	168 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	PAQR7	Q86WK9	346 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	TBC1D19	Q8N5T2	526 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	ABHD11	Q8NFV4	315 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	OR4F6	Q8NGB9	312 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	WDR34	Q96EX3	536 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	CTRC	Q99895	268 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	AIF1L	Q9BQI0	150 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	SHCBP1L	Q9BZQ2	653 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	FBXO8	Q9NRD0	319 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	TRPS1	Q9UHF7	1281 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	RAP2C	Q9Y3L5	183 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	AK5	Q9Y6K8	562 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	MDC1	Q14676	2089 aa	Known RBP	21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	TCP11X1	B4DZS4	312 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026		H7BY64	318 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	PPP6C	O00743	305 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	HCRTR1	O43613	425 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	BRINP1	O60477	761 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	OR4F21	O95013	312 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	ENO1	P06733	434 aa	Known RBP	21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	MSL3P1	P0C860	447 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	RBMS1	P29558	406 aa	Known RBP	21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	GRK3	P35626	688 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	GABRA4	P48169	554 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	RAB15	P59190	212 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	OCRL	Q01968	901 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	CYB5D1	Q6P9G0	228 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	SYVN1	Q86TM6	617 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	CRLF3	Q8IUI8	442 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	KRT78	Q8N1N4	520 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	DNAJC22	Q8N4W6	341 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	AFAP1L2	Q8N4X5	818 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	L3MBTL4	Q8NA19	623 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	GATA6	Q92908	595 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	USP7	Q93009	1102 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	ZNF501	Q96CX3	271 aa	Predicted RBP	21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	C7orf26	Q96N11	449 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	SLC46A1	Q96NT5	459 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	PRAP1	Q96NZ9	151 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	CDK15	Q96Q40	435 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	TAAR9	Q96RI9	348 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	PLCD4	Q9BRC7	762 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	ASCL3	Q9NQ33	180 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	FGF21	Q9NSA1	209 aa		21.02	■□□□□ 0.96
LTBP4-227	ENST00000600026	C9orf172	C9J069	976 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	UBFD1	O14562	309 aa	Known RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	POLR1C	O15160	346 aa	Predicted RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	WFS1	O76024	890 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	DXO	O77932	396 aa	Known RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	FGF5	P12034	268 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	HMOX2	P30519	316 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	ARRB2	P32121	409 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	ERVPABLB-1	P60509	514 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	GNGT1	P63211	74 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	COL9A2	Q14055	689 aa	Predicted RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	E2F2	Q14209	437 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	SLBP	Q14493	270 aa	Known RBP eCLIP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	GGTA1P	Q4G0N0	100 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	GRHL2	Q6ISB3	625 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	RNF44	Q7L0R7	432 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	UBE2E3	Q969T4	207 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	SORT1	Q99523	831 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	DDA1	Q9BW61	102 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	SLC29A3	Q9BZD2	475 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	PITHD1	Q9GZP4	211 aa	Predicted RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	ZNF395	Q9H8N7	513 aa	Predicted RBP	21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	FANCE	Q9HB96	536 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	RARRES3	Q9UL19	164 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	RNF11	Q9Y3C5	154 aa		21.01	■□□□□ 0.95
LTBP4-227	ENST00000600026	TMEM150C	B9EJG8	249 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	AZIN1	O14977	448 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	CTSV	O60911	334 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	VIM	P08670	466 aa	Known RBP	21	■□□□□ 0.95
LTBP4-227	ENST00000600026	VARS	P26640	1264 aa	Known RBP	21	■□□□□ 0.95
LTBP4-227	ENST00000600026	CSNK1G2	P78368	415 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	IL11RA	Q14626	422 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	SH2D4B	Q5SQS7	431 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	DCAF12	Q5T6F0	453 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	LETMD1	Q6P1Q0	360 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	CEACAM20	Q6UY09	585 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	FAM47E	Q6ZV65	393 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	CDYL2	Q8N8U2	506 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	OR4K1	Q8NGD4	311 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	METTL6	Q8TCB7	284 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	REPS1	Q96D71	796 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	C20orf27	Q9GZN8	174 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	PILRA	Q9UKJ1	303 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	PLCL2	Q9UPR0	1127 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	PCDHGA3	Q9Y5H0	932 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026	B3GALT1	Q9Y5Z6	326 aa		21	■□□□□ 0.95
LTBP4-227	ENST00000600026		A0A0J9YVX5	310 aa		20.99	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms