RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PCDHB11Q9Y5F2 797 aa21.87■■□□□ 1.09
SRRM1-222ENST00000596378 MGAT4DA6NG13 374 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 SOBPA7XYQ1 873 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 PSMD11O00231 422 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF197O14709 1029 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 PCDH7O60245 1069 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 CPNE6O95741 557 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 CYP4B1P13584 511 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 HSD3B1P14060 373 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 MATN1P21941 496 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 IDSP22304 550 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 HSD3B2P26439 372 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 DCKP27707 260 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 CALRP27797 417 aaKnown RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 AQP1P29972 269 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 STT3AP46977 705 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 EPS8Q12929 822 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF385BQ569K4 471 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 C6orf141Q5SZD1 244 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 IER5LQ5T953 404 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 BROXQ5VW32 411 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 XAF1Q6GPH4 301 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 CAPN13Q6MZZ7 669 aaPredicted RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 FKBP9P1Q75LS8 142 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 RTL10Q7L3V2 364 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 HIPK1Q86Z02 1210 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 C2orf73Q8N5S3 287 aaPredicted RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 HSH2DQ96JZ2 352 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 FZD4Q9ULV1 537 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 LZTS3O60299 673 aaPredicted RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 FOXD2O60548 495 aaPredicted RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 HTR1AP08908 422 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 ITGB7P26010 798 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 TIA1P31483 386 aaKnown RBP eCLIP21.86■■□□□ 1.094e-6■■□□□ 13.1
SRRM1-222ENST00000596378 NFE2L1Q14494 772 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 OR2T5Q6IEZ7 315 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 PDE12Q6L8Q7 609 aaKnown RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 SHQ1Q6PI26 577 aaKnown RBP21.86■■□□□ 1.09
SRRM1-222ENST00000596378 OR2T29Q8NH02 315 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 SNX19Q92543 992 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 NRTNQ99748 197 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 MYOCQ99972 504 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 SLC27A6Q9Y2P4 619 aa21.86■■□□□ 1.09
SRRM1-222ENST00000596378 FKBP9O95302 570 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 TGFB1P01137 390 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 ADRB3P13945 408 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 C21orf58P58505 322 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 ISL1P61371 349 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 GAB4Q2WGN9 574 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 BCL7AQ4VC05 210 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 RBM48Q5RL73 367 aaKnown RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF784Q8NCA9 323 aaPredicted RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 OR4K1Q8NGD4 311 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 SMG7Q92540 1137 aaKnown RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 HDAC2Q92769 488 aaKnown RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 AASSQ9UDR5 926 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 PLAGL1Q9UM63 463 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 XIRP2A4UGR9 3374 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 A0A1W2PPW3 197 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 C1orf226A1L170 272 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF8P17098 575 aaPredicted RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 IGFBP5P24593 272 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 VASPP50552 380 aaPredicted RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 PCDH1Q08174 1060 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 HNRNPA1L2Q32P51 320 aaKnown RBP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 SPIN4Q56A73 249 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.85■■□□□ 1.09
SRRM1-222ENST00000596378 NPAS3Q8IXF0 933 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 CNIH3Q8TBE1 160 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 TPD52L3Q96J77 140 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 IL17FQ96PD4 163 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 OR51B5Q9H339 312 aa21.85■■□□□ 1.09
SRRM1-222ENST00000596378 NUP210Q8TEM1 1887 aaPredicted RBP21.84■■□□□ 1.09
SRRM1-222ENST00000596378 TRANK1O15050 2925 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 HEPACAM2A8MVW5 462 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF701M0R085 212 aaPredicted RBP21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ABCB7O75027 752 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 SEMG1P04279 462 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 FABP3P05413 133 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 PCSK2P16519 638 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 HPCAL1P37235 193 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ASMTP46597 345 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 DAPP51397 102 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 CRYBA2P53672 197 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 HPCAP84074 193 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 MC1RQ01726 317 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 RAPSNQ13702 412 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 FGD3Q5JSP0 725 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF691Q5VV52 312 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF852Q6ZMS4 543 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 FAM83HQ6ZRV2 1179 aaPredicted RBP21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ARMCX6Q7L4S7 300 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ADGRD2Q7Z7M1 963 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 SYNPOQ8N3V7 929 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 ZNF740Q8NDX6 193 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 OR13F1Q8NGS4 319 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 OR8D1Q8WZ84 308 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 RIBC2Q9H4K1 309 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 EPHX3Q9H6B9 360 aa21.84■■□□□ 1.09
SRRM1-222ENST00000596378 TMEM98Q9Y2Y6 226 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms