RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CD244Q9BZW8 370 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 WDR54Q9H977 334 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 PPCSQ9HAB8 311 aa16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 PTRH2Q9Y3E5 179 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-212ENST00000596163 FEZF1A0PJY2 475 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 LCMT2O60294 686 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 C1GALT1C1LP0DN25 315 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 ITGAXP20702 1163 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 AHRP35869 848 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 BCL6P41182 706 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 GDF5P43026 501 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 MAGEA12P43365 314 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 OR1D4P47884 311 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 KCNC1P48547 511 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 HSPA7P48741 367 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 IRF9Q00978 393 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 OCA2Q04671 838 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 PWP1Q13610 501 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC9A5Q14940 896 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 TIFABQ6ZNK6 161 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 LRRC70Q7Z2Q7 622 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 TMPRSS11BQ86T26 416 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 KRT78Q8N1N4 520 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 SNX31Q8N9S9 440 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 TRPV3Q8NET8 790 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 OR2Y1Q8NGV0 311 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 UBLCP1Q8WVY7 318 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 TM4SF19Q96DZ7 209 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 C10orf90Q96M02 699 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 PITHD1Q9GZP4 211 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 DRC3Q9H069 523 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC26A1Q9H2B4 701 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 ANKZF1Q9H8Y5 726 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 ZFP69BQ9UJL9 534 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 RALYQ9UKM9 306 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 TMCO1Q9UM00 188 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 MAN2B2Q9Y2E5 1009 aa16.46■□□□□ 0.23
SHKBP1-212ENST00000596163 PCM1Q15154 2024 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 MAP2K7O14733 419 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 CCNT2O60583 730 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 KLF7O75840 302 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 IGHEP01854 428 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 MYBL2P10244 700 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 GFAPP14136 432 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 FBLP22087 321 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 GMPRP36959 345 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 GLRBP48167 497 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 REEP5Q00765 189 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 MEF2AQ02078 507 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 RGS1Q08116 209 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 RBBP5Q15291 538 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 PDK4Q16654 411 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 ATP1A1-AS1Q5TC04 95 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 ATG9BQ674R7 924 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 VN1R4Q7Z5H5 301 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 TTLQ8NG68 377 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 NACC2Q96BF6 587 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 MMABQ96EY8 250 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 VPS50Q96JG6 964 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 TMEM79Q9BSE2 394 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 ADNPQ9H2P0 1102 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 EHD1Q9H4M9 534 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 PSMC3IPQ9P2W1 217 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 OPTCQ9UBM4 332 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 ZNF282Q9UDV7 671 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 TNPO3Q9Y5L0 923 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 MAU2Q9Y6X3 613 aa16.45■□□□□ 0.22
SHKBP1-212ENST00000596163 ITPR1Q14643 2758 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 URADA6NGE7 173 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 H0YIG0 161 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 UBXN8O00124 270 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 P2RX6O15547 441 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SPTBP11277 2137 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 GSTM2P28161 218 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SCTRP47872 440 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SKP1P63208 163 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 NFKB2Q00653 900 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 LAPTM5Q13571 262 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 DSG2Q14126 1118 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 HIST2H2ACQ16777 129 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 LINC00303Q3SY05 128 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 PAGE2BQ5JRK9 111 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 HIST2H2AA3Q6FI13 130 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SLCO4C1Q6ZQN7 724 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 LCA5Q86VQ0 697 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 METTL27Q8N6F8 245 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 UBTD2Q8WUN7 234 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SLC39A7Q92504 469 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SEC16BQ96JE7 1060 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 GPR78Q96P69 363 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 YIPF2Q9BWQ6 316 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 NT5DC2Q9H857 520 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 ANKHQ9HCJ1 492 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 ANGPTL3Q9Y5C1 460 aa16.44■□□□□ 0.22
SHKBP1-212ENST00000596163 SLC22A7Q9Y694 548 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms