RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ASNA1O43681 348 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 NEURL1O76050 574 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 VAPBO95292 243 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 NSA2O95478 260 aaKnown RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 MLYCDO95822 493 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 STATHP02808 62 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 CATP04040 527 aaKnown RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 AVPR1BP47901 424 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 OR1C1Q15619 314 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 EXT1Q16394 746 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 MEP1AQ16819 746 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 KRTAP21-3Q3LHN1 58 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 MINDY4Q4G0A6 757 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 SPINK14Q6IE38 97 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 MRNIPQ6NTE8 343 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 CES3Q6UWW8 571 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 FGD2Q7Z6J4 655 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 PCGF5Q86SE9 256 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 CDH24Q86UP0 819 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 SLC13A5Q86YT5 568 aaPredicted RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 CEP97Q8IW35 865 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 FBXO15Q8NCQ5 510 aaPredicted RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 OR51Q1Q8NH59 317 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 GIMAP7Q8NHV1 300 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 PHF10Q8WUB8 498 aaKnown RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 DMRTA2Q96SC8 542 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 TCF12Q99081 682 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 UTP23Q9BRU9 249 aaKnown RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 KCNK13Q9HB14 408 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 MCCC2Q9HCC0 563 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 MMP25Q9NPA2 562 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 C19orf25Q9UFG5 118 aaPredicted RBP9.4□□□□□ -0.9
LIG1-209ENST00000596104 NPIPA1Q9UND3 350 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 CRYL1Q9Y2S2 319 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 MED16Q9Y2X0 877 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 CAPN6Q9Y6Q1 641 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 PCNX1Q96RV3 2341 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 CPAMD8Q8IZJ3 1885 aa9.4□□□□□ -0.91
LIG1-209ENST00000596104 NCOA6Q14686 2063 aaPredicted RBP9.4□□□□□ -0.91
LIG1-209ENST00000596104 KCNE1BA0A087WTH5 132 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 ZNF839A8K0R7 811 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 GABRR3A8MPY1 467 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 E9PLN8 166 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 H7BY64 318 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 ZNHIT1O43257 154 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 CD46P15529 392 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 IL1RNP18510 177 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 CHRM3P20309 590 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 OGNP20774 298 aaKnown RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 PTMSP20962 102 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 MGAT1P26572 445 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 EEF1DP29692 281 aaKnown RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 BCL6P41182 706 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 SKIV2L2P42285 1042 aaKnown RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 XCR1P46094 333 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 NPY2RP49146 381 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 AGTR2P50052 363 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 CLCN7P51798 805 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 TLE4Q04727 773 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 SNX1Q13596 522 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 PTK6Q13882 451 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 SIX1Q15475 284 aaPredicted RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 MFSD4BQ5TF39 518 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 PAPD4Q6PIY7 484 aaKnown RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 CENPUQ71F23 418 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 GALNTL5Q7Z4T8 443 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 ADCK2Q7Z695 626 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 SDCCAG8Q86SQ7 713 aaPredicted RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 KIAA1328Q86T90 577 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 PDSS2Q86YH6 399 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 DOLPP1Q86YN1 238 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 CCDC89Q8N998 374 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 TMEM178AQ8NBL3 297 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 M1APQ8TC57 530 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 AGAP11Q8TF27 550 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 ASB11Q8WXH4 323 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 PRAP1Q96NZ9 151 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 EBNA1BP2Q99848 306 aaKnown RBP9.39□□□□□ -0.91
LIG1-209ENST00000596104 MACROD1Q9BQ69 325 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 VKORC1Q9BQB6 163 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 SYBUQ9NX95 663 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 BFARQ9NZS9 450 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 HCN3Q9P1Z3 774 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 ASB1Q9Y576 335 aa9.39□□□□□ -0.91
LIG1-209ENST00000596104 GFYI3L273 518 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 SGK494L7N484 410 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 AP3B1O00203 1094 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 KIF5CO60282 957 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 SP1P08047 785 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 IMPA1P29218 277 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 HSF1Q00613 529 aa9.38□□□□□ -0.91
LIG1-209ENST00000596104 RHAGQ02094 409 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms