RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NEK2P51955 445 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 UGT2B15P54855 530 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 FPGSQ05932 587 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 ANXA8L1Q5VT79 327 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 C19orf48Q6RUI8 117 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 ZNF367Q7RTV3 350 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 PARP16Q8N5Y8 322 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 GALNT6Q8NCL4 622 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 ASB11Q8WXH4 323 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 MYOCQ99972 504 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 CCDC32Q9BV29 185 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 C6orf62Q9GZU0 229 aaPredicted RBP12.8□□□□□ -0.36
VRK3-209ENST00000594948 TPT1P8Q9HAU6 139 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
VRK3-209ENST00000594948 POU2F3Q9UKI9 436 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 PCDHGA2Q9Y5H1 932 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 LYVE1Q9Y5Y7 322 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 OBSL1O75147 1896 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 C1orf226A1L170 272 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 GFRA2O00451 464 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 OR56A5P0C7T3 313 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 DBTP11182 482 aaKnown RBP12.79□□□□□ -0.36
VRK3-209ENST00000594948 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
VRK3-209ENST00000594948 CYP2A7P20853 494 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 RRM2P31350 389 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 CCR7P32248 378 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 SLC11A1P49279 550 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 KCNC3Q14003 757 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 ZXDCQ2QGD7 858 aaPredicted RBP12.79□□□□□ -0.36
VRK3-209ENST00000594948 PTCHD3Q3KNS1 767 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 RASGRP3Q8IV61 690 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 ADGRG2Q8IZP9 1017 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 METTL4Q8N3J2 472 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
VRK3-209ENST00000594948 OR4C15Q8NGM1 316 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 ATL1Q8WXF7 558 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 HTRA1Q92743 480 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 COPS8Q99627 209 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 TMEM175Q9BSA9 504 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 RUBCNLQ9H714 662 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 GKN1Q9NS71 199 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 SPATA6Q9NWH7 488 aaPredicted RBP12.79□□□□□ -0.36
VRK3-209ENST00000594948 ENOPH1Q9UHY7 261 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.79□□□□□ -0.36
VRK3-209ENST00000594948 SRCAPQ6ZRS2 3230 aa12.79□□□□□ -0.36
VRK3-209ENST00000594948 FAM47E-STBD1D6RA91 191 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 GFYI3L273 518 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 TNFRSF11BO00300 401 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 SCAMP2O15127 329 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 KPNA5O15131 536 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CPSF4O95639 269 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 APOA1P02647 267 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 ADORA3P0DMS8 318 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 SOX6P35712 828 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CSKP41240 450 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 GJA8P48165 433 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 ALDH9A1P49189 494 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CRYBA2P53672 197 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 SELENOWP63302 87 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PCDH1Q08174 1060 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 MBTPS1Q14703 1052 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 C10orf62Q5T681 223 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 ZDHHC20Q5W0Z9 365 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 SLC8B1Q6J4K2 584 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 ZNF605Q86T29 641 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 KLHDC8AQ8IYD2 350 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 C11orf65Q8NCR3 313 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 FAM83FQ8NEG4 500 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 VPS37AQ8NEZ2 397 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 OR10G2Q8NGC3 310 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 C11orf24Q96F05 449 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 TRMT2BQ96GJ1 504 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 TPD52L3Q96J77 140 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 KCNC2Q96PR1 638 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 DUSP26Q9BV47 211 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 THSD1Q9NS62 852 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 VPS29Q9UBQ0 182 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 ZNF282Q9UDV7 671 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 TRAPPC4Q9Y296 219 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PCDHGB6Q9Y5F9 930 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 NUP214P35658 2090 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 A0A075B6Q4 140 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CXorf51AA0A1B0GTR3 108 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 SH3D21A4FU49 640 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 TMEM229AB2RXF0 380 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PRAMEF4O60810 478 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 VIPP01282 170 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 IRF1P10914 325 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 C21orf33P30042 268 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms