RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 NBASA2RRP1 2371 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CELSR1Q9NYQ6 3014 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ICE1Q9Y2F5 2266 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 C1orf226A1L170 272 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 OR6C68A6NDL8 312 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CBY3A6NI87 242 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ACOD1A6NK06 481 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ASB14A6NK59 587 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SHISA7A6NL88 538 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 KLRF2D3W0D1 207 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 K7EQM0 130 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ETV2O00321 342 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 DSCR3O14972 297 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CTDSPLO15194 276 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TLX2O43763 284 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SLC28A2O43868 658 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 MOSPD3O75425 235 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CIB2O75838 187 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SUN1O94901 812 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TJP3O95049 919 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CBX6O95503 412 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 BAG3O95817 575 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SERPINA3P01011 423 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 IL1BP01584 269 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HOXB5P09067 269 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 UQCRFS1P1P0C7P4 283 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 STAG3L3P0CL85 134 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 MED14OSP0DP75 135 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CCDC130P13994 396 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SLC2A4P14672 509 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 GJA1P17302 382 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 UGT1A6P19224 532 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HOXD9P28356 352 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TYK2P29597 1187 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 PKLRP30613 574 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 MAGEB1P43366 347 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 RAP1GAPP47736 663 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ANXA11P50995 505 aaKnown RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HNRNPFP52597 415 aaKnown RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CLDN2P57739 230 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SLC20A2Q08357 652 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 DNASE1L3Q13609 305 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HNRNPDQ14103 355 aaKnown RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 GRM7Q14831 915 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ELAVL1Q15717 326 aaKnown RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SMTNL2Q2TAL5 461 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 USP41Q3LFD5 358 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ARHGEF16Q5VV41 709 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 KCTD11Q693B1 232 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HIST2H2BCQ6DN03 193 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HIST2H2BDQ6DRA6 164 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TCEAL6Q6IPX3 200 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CTR9Q6PD62 1173 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CCNI2Q6ZMN8 369 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 LRRC70Q7Z2Q7 622 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TMPRSS9Q7Z410 1059 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 NEK8Q86SG6 692 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TSPAN33Q86UF1 283 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 LUZP1Q86V48 1076 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 GRAMD2AQ8IUY3 354 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ZDHHC21Q8IVQ6 265 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 FBXO16Q8IX29 292 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 LINC00469Q8N7U9 141 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SCAIQ8N9R8 606 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 LEMD2Q8NC56 503 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 BHLHE23Q8NDY6 225 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 DEFB124Q8NES8 71 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TRIM58Q8NG06 486 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 OR52L2PQ8NGH6 319 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 OR52B4Q8NGK2 314 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 OR14L1PQ8NHC6 308 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 B4GALNT2Q8NHY0 566 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ATG4AQ8WYN0 398 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 RAD54LQ92698 747 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 KAT2BQ92831 832 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 DVL3Q92997 716 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TCEAL3Q969E4 200 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ESAMQ96AP7 390 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 DACT3Q96B18 629 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TMIGD2Q96BF3 282 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 C19orf60Q96EN9 201 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 C11orf24Q96F05 449 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 VCPIP1Q96JH7 1222 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ATP6V1G3Q96LB4 118 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 PLEKHG4BQ96PX9 1271 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 BBS4Q96RK4 519 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 LMF1Q96S06 567 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ZNF607Q96SK3 696 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 PLIN2Q99541 437 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TUBA1CQ9BQE3 449 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 SEMA4CQ9C0C4 833 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 HAUS4Q9H6D7 363 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 METTL7AQ9H8H3 244 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TRIM36Q9NQ86 728 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 ENTPD7Q9NQZ7 604 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 FARSBQ9NSD9 589 aaKnown RBP4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TBC1D13Q9NVG8 400 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 TMEM248Q9NWD8 314 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 DNAJB4Q9UDY4 337 aa4.04□□□□□ -1.76
LINC00649-204ENST00000593977 CNOT6Q9ULM6 557 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms