RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PGBD3Q8N328 593 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 OR10Q1Q8NGQ4 319 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 SLC5A11Q8WWX8 675 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 TMIGD2Q96BF3 282 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 PHF12Q96QT6 1004 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 OSBPL10Q9BXB5 764 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 SLC23A2Q9UGH3 650 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 EXO1Q9UQ84 846 aaKnown RBP18.98■□□□□ 0.63
MBD3-209ENST00000592012 ASF1AQ9Y294 204 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 PCDHB11Q9Y5F2 797 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 CEPT1Q9Y6K0 416 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 A0A087WXM4 84 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 GNG14A0A1W2PPG7 69 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 IGLON5A6NGN9 336 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 THRBP10828 461 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 EFNA1P20827 205 aaPredicted RBP18.98■□□□□ 0.63
MBD3-209ENST00000592012 ROR2Q01974 943 aaKnown RBP18.98■□□□□ 0.63
MBD3-209ENST00000592012 MYBPC3Q14896 1274 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 PLCL1Q15111 1095 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 VMACQ2NL98 169 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 PAGE2BQ5JRK9 111 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 FAM46CQ5VWP2 391 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 NXPE4Q6UWF7 544 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 ARMCX6Q7L4S7 300 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 AMZ2Q86W34 360 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 ADHFE1Q8IWW8 467 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 ZZZ3Q8IYH5 903 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 HS3ST5Q8IZT8 346 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 EID3Q8N140 333 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 ZCCHC7Q8N3Z6 543 aaKnown RBP18.98■□□□□ 0.63
MBD3-209ENST00000592012 SVOPLQ8N434 492 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.98■□□□□ 0.63
MBD3-209ENST00000592012 ADAMTS16Q8TE57 1224 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 LGR4Q9BXB1 951 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 SPNS1Q9H2V7 528 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 IGFLR1Q9H665 355 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 SMURF2Q9HAU4 748 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 CCDC177Q9NQR7 707 aaPredicted RBP18.98■□□□□ 0.63
MBD3-209ENST00000592012 SIRT5Q9NXA8 310 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 BTNL2Q9UIR0 455 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 MAPRE3Q9UPY8 281 aa18.98■□□□□ 0.63
MBD3-209ENST00000592012 CCDC160A6NGH7 325 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 PCDH7O60245 1069 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 TAS2R38P59533 333 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 PPP2R2BQ00005 443 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 VAC14Q08AM6 782 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 CPZQ66K79 652 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 PTOV1Q86YD1 416 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 SETD7Q8WTS6 366 aaKnown RBP18.97■□□□□ 0.63
MBD3-209ENST00000592012 SDCCAG3Q96C92 435 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 MUS81Q96NY9 551 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 TPT1P8Q9HAU6 139 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 DMRT3Q9NQL9 472 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 SAMD4AQ9UPU9 718 aaKnown RBP18.97■□□□□ 0.63
MBD3-209ENST00000592012 SPTBN5Q9NRC6 3674 aaKnown RBP18.97■□□□□ 0.63
MBD3-209ENST00000592012 MAGEA2P43356 314 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 MEF2AQ02078 507 aaPredicted RBP18.97■□□□□ 0.63
MBD3-209ENST00000592012 PPP1R8Q12972 351 aaKnown RBP18.97■□□□□ 0.63
MBD3-209ENST00000592012 LSAMPQ13449 338 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 HIST2H2ACQ16777 129 aaPredicted RBP18.97■□□□□ 0.63
MBD3-209ENST00000592012 HIST2H2AA3Q6FI13 130 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 TMEM179BQ7Z7N9 219 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 PDZD3Q86UT5 571 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 VPS37AQ8NEZ2 397 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 OR5AR1Q8NGP9 310 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 RDH12Q96NR8 316 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 IL17FQ96PD4 163 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 CDH7Q9ULB5 785 aa18.97■□□□□ 0.63
MBD3-209ENST00000592012 C1orf226A1L170 272 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 PI15O43692 258 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 TGFB1P01137 390 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 HPCAL1P37235 193 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 CDK3Q00526 305 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 RPA4Q13156 261 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 RBBP5Q15291 538 aaKnown RBP18.96■□□□□ 0.63
MBD3-209ENST00000592012 WSCD2Q2TBF2 565 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 COMMD6Q7Z4G1 85 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 CHPFQ8IZ52 775 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 PNPT1Q8TCS8 783 aaKnown RBP18.96■□□□□ 0.63
MBD3-209ENST00000592012 RAD51AP1Q96B01 352 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 DZANK1Q9NVP4 752 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 USE1Q9NZ43 259 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 CEP290O15078 2479 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 MID1O15344 667 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 PCCBP05166 539 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 CDH2P19022 906 aaPredicted RBP18.96■□□□□ 0.63
MBD3-209ENST00000592012 DCTP40126 519 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 SPIDRQ14159 915 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 C16orf72Q14CZ0 275 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 SHHQ15465 462 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.96■□□□□ 0.63
MBD3-209ENST00000592012 LRRC23Q53EV4 343 aaPredicted RBP18.96■□□□□ 0.63
MBD3-209ENST00000592012 ANXA8L1Q5VT79 327 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 AGBL4Q5VU57 503 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 ERICH5Q6P6B1 374 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 CACUL1Q86Y37 369 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 ZNF740Q8NDX6 193 aa18.96■□□□□ 0.63
MBD3-209ENST00000592012 TFGQ92734 400 aaPredicted RBP18.96■□□□□ 0.63
MBD3-209ENST00000592012 RBM4BQ9BQ04 359 aaKnown RBP18.96■□□□□ 0.63
MBD3-209ENST00000592012 DPH2Q9BQC3 489 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms