RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ARF3P61204 181 aaPredicted RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MAGOHP61326 146 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SKP1P63208 163 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 YBX1P67809 324 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PHEXP78562 749 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 REEP5Q00765 189 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF33BQ06732 778 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 RGS1Q08116 209 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CYP4F3Q08477 520 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 LCP2Q13094 533 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CHIT1Q13231 466 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 FAM53BQ14153 422 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 DOC2AQ14183 400 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 RBBP5Q15291 538 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MUM1Q2TAK8 710 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PRTGQ2VWP7 1150 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 C18orf21Q32NC0 220 aaPredicted RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 RHBDD2Q6NTF9 364 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PWWP2BQ6NUJ5 590 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MED27Q6P2C8 311 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PRMT9Q6P2P2 845 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 GOLGA7Q7Z5G4 137 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MILR1Q7Z6M3 343 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ASPGQ86U10 573 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MARCH9Q86YJ5 346 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 KIRREL3Q8IZU9 778 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ESX1Q8N693 406 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CSNK1A1LQ8N752 337 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 OR1L3Q8NH93 324 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PROKR1Q8TCW9 393 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF483Q8TF39 744 aaPredicted RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SLC13A3Q8WWT9 602 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ESAMQ96AP7 390 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 TM4SF19Q96DZ7 209 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MVB12AQ96EY5 273 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CNDP1Q96KN2 507 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ATP6V1G3Q96LB4 118 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 EFHD1Q9BUP0 239 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 DPH1Q9BZG8 443 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ULBP3Q9BZM4 244 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SPRY4Q9C004 299 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ASXL3Q9C0F0 2248 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 RHBGQ9H310 441 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 NOL11Q9H8H0 719 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CLK4Q9HAZ1 481 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 EML4Q9HC35 981 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 TXLNGQ9NUQ3 528 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 GEMIN8Q9NWZ8 242 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 NKIRAS1Q9NYS0 192 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PADI1Q9ULC6 663 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PCDHGA4Q9Y5G9 962 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ZFC3H1O60293 1989 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 A0A088AWK7 358 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 FEZF1A0PJY2 475 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 HYKKA2RU49 373 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 FOXE1O00358 373 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 DYNC1I1O14576 645 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF749O43361 778 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 LCMT2O60294 686 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 NPHS1O60500 1241 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 CLEC3AO75596 197 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 STK17BO94768 372 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 EIF2S1P05198 315 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 BPGMP07738 259 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SERPINA6P08185 405 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 EPORP19235 508 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF10P21506 573 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 GRK2P25098 689 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 BCL6P41182 706 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 PIK3CBP42338 1070 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ETV4P43268 484 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 STXBP1P61764 594 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 TGM3Q08188 693 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ABHD18Q0P651 414 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 GALNT1Q10472 559 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SLBPQ14493 270 aaKnown RBP eCLIP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 RBBP7Q16576 425 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 GGTA1PQ4G0N0 100 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM35AQ53FP2 167 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 UNC50Q53HI1 259 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 HSP90B2PQ58FF3 399 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 FBXO48Q5FWF7 155 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 GRHL2Q6ISB3 625 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 C6orf15Q6UXA7 325 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 NUDCD3Q8IVD9 361 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 C10orf107Q8IVU9 208 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 TRIM42Q8IWZ5 723 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 LAS2Q8IYD9 372 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 NLGN4XQ8N0W4 816 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 CCNYL1Q8N7R7 359 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF248Q8NDW4 579 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SRFBP1Q8NEF9 429 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 NLGN4YQ8NFZ3 816 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SNIP1Q8TAD8 396 aaKnown RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 NT5CQ8TCD5 201 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 GATA6Q92908 595 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 CLIP3Q96DZ5 547 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM237Q96Q45 408 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms