RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 POLR2EP19388 210 aaKnown RBP17.96■□□□□ 0.47
DDX39A-206ENST00000587730 RBBP4Q09028 425 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 HSPA14Q0VDF9 509 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 CPTPQ5TA50 214 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 LRRC66Q68CR7 880 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 C9orf43Q8TAL5 461 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-206ENST00000587730 CPEB1Q9BZB8 566 aaKnown RBP17.96■□□□□ 0.47
DDX39A-206ENST00000587730 RAD18Q9NS91 495 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 FKBP14Q9NWM8 211 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 RNF6Q9Y252 685 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 SLC22A14Q9Y267 594 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 MICAL3Q7RTP6 2002 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 SCN8AQ9UQD0 1980 aa17.96■□□□□ 0.47
DDX39A-206ENST00000587730 CLCA1A8K7I4 914 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 PCDHGA12O60330 932 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 GREM1O60565 184 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 PTTG1O95997 202 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 RPLP0P05388 317 aaKnown RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 ATP1B2P14415 290 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 GATMP50440 423 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 LSM3P62310 102 aaKnown RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 B4GALNT1Q00973 533 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 IFITM3Q01628 133 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 CREMQ03060 361 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 PRKCDQ05655 676 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 ATP13A5Q4VNC0 1218 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 SPIN4Q56A73 249 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 TMEM236Q5W0B7 351 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 VTCN1Q7Z7D3 282 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 TMEM173Q86WV6 379 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 RASGRP3Q8IV61 690 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 APCDD1Q8J025 514 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 OR10Q1Q8NGQ4 319 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 FIBINQ8TAL6 211 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 CD99L2Q8TCZ2 262 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 ZNF296Q8WUU4 475 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 BCL7CQ8WUZ0 217 aaPredicted RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 ASZ1Q8WWH4 475 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 TIFAQ96CG3 184 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 EGLN2Q96KS0 407 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 COL21A1Q96P44 957 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 NXF2Q9GZY0 626 aaKnown RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 CHST8Q9H2A9 424 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 SPASTQ9UBP0 616 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 PCDHGA6Q9Y5G7 932 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 BRCA2P51587 3418 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 PNMA8CA0A1B0GUJ8 204 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 AGAP5A6NIR3 686 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 METTL15A6NJ78 407 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 MAN1A2O60476 641 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 IFNA14P01570 189 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 CDK1P06493 297 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 S100A5P33763 92 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 RPL3P39023 403 aaKnown RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 EPHB3P54753 998 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 KCNJ10P78508 379 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 TIMM50Q3ZCQ8 353 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 IQCCQ4KMZ1 466 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 GRHL2Q6ISB3 625 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 PDE12Q6L8Q7 609 aaKnown RBP17.95■□□□□ 0.46
DDX39A-206ENST00000587730 NPAS3Q8IXF0 933 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 CRIPAKQ8N1N5 446 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 DNAJC22Q8N4W6 341 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 NAT16Q8N8M0 369 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 WDR20Q8TBZ3 569 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 APH1BQ8WW43 257 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 STARD7Q9NQZ5 370 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 RASSF1Q9NS23 344 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 FZD4Q9ULV1 537 aa17.95■□□□□ 0.46
DDX39A-206ENST00000587730 MPZL2O60487 215 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 NBNO60934 754 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 CPSF4O95639 269 aaKnown RBP17.94■□□□□ 0.46
DDX39A-206ENST00000587730 GSTM1P09488 218 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 FSHRP23945 695 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 ALDH4A1P30038 563 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 POLR2LP62875 67 aaKnown RBP17.94■□□□□ 0.46
DDX39A-206ENST00000587730 LAPTM4AQ15012 233 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 TIGD6Q17RP2 521 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 LAIR1Q6GTX8 287 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 PNCKQ6P2M8 343 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 TSPAN33Q86UF1 283 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 CCDC71Q8IV32 467 aaPredicted RBP17.94■□□□□ 0.46
DDX39A-206ENST00000587730 WFDC5Q8TCV5 224 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 COQ8BQ96D53 544 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 C11orf24Q96F05 449 aaPredicted RBP17.94■□□□□ 0.46
DDX39A-206ENST00000587730 TPD52L3Q96J77 140 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 P2RY13Q9BPV8 354 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 CLSTN3Q9BQT9 956 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 EHD1Q9H4M9 534 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 RAPGEFL1Q9UHV5 662 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 ZNF229Q9UJW7 825 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 PEX16Q9Y5Y5 336 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 PLXNA4Q9HCM2 1894 aa17.94■□□□□ 0.46
DDX39A-206ENST00000587730 C1orf226A1L170 272 aa17.93■□□□□ 0.46
DDX39A-206ENST00000587730 HTR3EA5X5Y0 456 aa17.93■□□□□ 0.46
DDX39A-206ENST00000587730 TNFRSF11BO00300 401 aa17.93■□□□□ 0.46
DDX39A-206ENST00000587730 RNASET2O00584 256 aaKnown RBP17.93■□□□□ 0.46
DDX39A-206ENST00000587730 RPL17P18621 184 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms