RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CRYL1Q9Y2S2 319 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 CACNA1CQ13936 2221 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 H0YIG0 161 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 H7BY64 318 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 SMAPO00193 183 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 NSA2O95478 260 aaKnown RBP11.2□□□□□ -0.62
BRCA1-225ENST00000586385 ESR1P03372 595 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 IL1RNP18510 177 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 MGAT1P26572 445 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 XCR1P46094 333 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 SMSP52788 366 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 ADARP55265 1226 aaKnown RBP11.2□□□□□ -0.62
BRCA1-225ENST00000586385 AP2B1P63010 937 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 RHAGQ02094 409 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 KRTCAP3Q53RY4 240 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 TMEM214Q6NUQ4 689 aaKnown RBP11.2□□□□□ -0.62
BRCA1-225ENST00000586385 CYHR1Q6ZMK1 362 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 C3P1Q6ZMU1 363 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 DOLPP1Q86YN1 238 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 SLC13A5Q86YT5 568 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-225ENST00000586385 FBXO15Q8NCQ5 510 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-225ENST00000586385 OR51Q1Q8NH59 317 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 AGAP11Q8TF27 550 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 RERGQ96A58 199 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-225ENST00000586385 MAGED4Q96JG8 741 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 ZNF354BQ96LW1 612 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 PRAP1Q96NZ9 151 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 SPOCK3Q9BQ16 436 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 IL22Q9GZX6 179 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 LANCL2Q9NS86 450 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 PAK5Q9P286 719 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 TEKT2Q9UIF3 430 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 HRH3Q9Y5N1 445 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 HEATR5BQ9P2D3 2071 aa11.2□□□□□ -0.62
BRCA1-225ENST00000586385 TCRBV7S3A2A0A539 114 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 GFYI3L273 518 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 SGK494L7N484 410 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 TTI1O43156 1089 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ASNA1O43681 348 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 DNAJB6O75190 326 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 CYC1P08574 325 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ESRRAP11474 423 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-225ENST00000586385 PKMP14618 531 aaKnown RBP11.19□□□□□ -0.62
BRCA1-225ENST00000586385 CHRM3P20309 590 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 IMPA1P29218 277 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 BCL6P41182 706 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 SKIV2L2P42285 1042 aaKnown RBP11.19□□□□□ -0.62
BRCA1-225ENST00000586385 CASP6P55212 293 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 CSNK1G2P78368 415 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ABATP80404 500 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ALDH6A1Q02252 535 aaKnown RBP11.19□□□□□ -0.62
BRCA1-225ENST00000586385 TLE4Q04727 773 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 CUL1Q13616 776 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 MINDY4Q4G0A6 757 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ZNF549Q6P9A3 640 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 GALNTL5Q7Z4T8 443 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-225ENST00000586385 CDH24Q86UP0 819 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 M1APQ8TC57 530 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 METTL21AQ8WXB1 218 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ASB11Q8WXH4 323 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 TSLPQ969D9 159 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 TM4SF19Q96DZ7 209 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 DESI2Q9BSY9 194 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 FRMD8P1Q9BZ68 369 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-225ENST00000586385 KCNK13Q9HB14 408 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 MMP25Q9NPA2 562 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 FAM114A2Q9NRY5 505 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 ABCF3Q9NUQ8 709 aa11.19□□□□□ -0.62
BRCA1-225ENST00000586385 KCNE1BA0A087WTH5 132 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 GABRR3A8MPY1 467 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 H3BMM5 538 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 TXNDC9O14530 226 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 LCMT2O60294 686 aaKnown RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 RDH16O75452 317 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 CCNDBP1O95273 360 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 CATP04040 527 aaKnown RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 SP1P08047 785 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 IGFBP2P18065 325 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 CAPN3P20807 821 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 HSD17B2P37059 387 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 COILP38432 576 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 AVPR1BP47901 424 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 NPY2RP49146 381 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 PTK6Q13882 451 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 USP10Q14694 798 aaKnown RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 NDUFA9Q16795 377 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 MEP1AQ16819 746 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 SFT2D3Q587I9 215 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 KIAA0930Q6ICG6 404 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 MRNIPQ6NTE8 343 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 PAPD4Q6PIY7 484 aaKnown RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 ADCK2Q7Z695 626 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 PCGF5Q86SE9 256 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 KIAA1328Q86T90 577 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 CILP2Q8IUL8 1156 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 CEP97Q8IW35 865 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms