RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CDH1P12830 882 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ALAS2P22557 587 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 SERPINB1P30740 379 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 FOLR3P41439 243 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 CCR10P46092 362 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 AVPR1BP47901 424 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 IRF9Q00978 393 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 RGS1Q08116 209 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 PCDH1Q08174 1060 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 DLG1Q12959 904 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 SSPNQ14714 243 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 OR4D1Q15615 310 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 TBCCQ15814 346 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 PRAMEF17Q5VTA0 474 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ATG9BQ674R7 924 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 OVCH1Q7RTY7 1134 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 TMPRSS11BQ86T26 416 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 CENPLQ8N0S6 344 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 RIBC1Q8N443 379 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 PYCR2Q96C36 320 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 NXNL1Q96CM4 212 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 WDR34Q96EX3 536 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 OR4K3Q96R72 315 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ARHGAP9Q9BRR9 750 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 DRC3Q9H069 523 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ALG9Q9H6U8 611 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ZNF304Q9HCX3 659 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ABCF3Q9NUQ8 709 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 ZFP69BQ9UJL9 534 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 SLC22A7Q9Y694 548 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 IGLV3-12A0A075B6K2 115 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 LOC105369274A0A096LPK9 316 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 LOC102723532A0A0G2JNH3 316 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 SYNDIG1LA6NDD5 238 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 SUPT3HB4E1H0 165 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 TRIM49D1C9J1S8 452 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 KLK8O60259 260 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 UGDHO60701 494 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 SUPT3HO75486 399 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 NSA2O95478 260 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 EIF2S1P05198 315 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 C1GALT1C1LP0DN25 315 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 IL10P22301 178 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 F8A1P23610 371 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 SCTRP47872 440 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 RRADP55042 308 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 OCA2Q04671 838 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 SRSF6Q13247 344 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 DSG2Q14126 1118 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 E2F2Q14209 437 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 HERC3Q15034 1050 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 PDK4Q16654 411 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 ZXDCQ2QGD7 858 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 OR4N4Q8N0Y3 316 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 OR2W6PQ8NHA6 318 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 NT5CQ8TCD5 201 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 KCTD4Q8WVF5 259 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 SLC13A3Q8WWT9 602 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 TM4SF19Q96DZ7 209 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 PTCD3Q96EY7 689 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 TMEM79Q9BSE2 394 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 CD244Q9BZW8 370 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 VPS11Q9H270 941 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 MKKSQ9NPJ1 570 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 MAP4K5Q9Y4K4 846 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 FER1L5A0AVI2 2057 aa13.16□□□□□ -0.3
PRKCSH-202ENST00000585540 A0A088AWK7 358 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 STX16-NPEPL1H3BU86 382 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 K7EPI3 171 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 STX16O14662 325 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 GSTA1P08263 222 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 ZNF10P21506 573 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 FBLP22087 321 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 BCL6P41182 706 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 YBX1P67809 324 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 PCBP2Q15366 365 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 HIST2H2ACQ16777 129 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 TECRLQ5HYJ1 363 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 C10orf62Q5T681 223 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 HIST2H2AA3Q6FI13 130 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 TMEM214Q6NUQ4 689 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 MED25Q71SY5 747 aa13.15□□□□□ -0.3
PRKCSH-202ENST00000585540 ABHD13Q7L211 337 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms