RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SMU1Q2TAY7 513 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LCN8Q6JVE9 175 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SPESP1Q6UW49 350 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 USP43Q70EL4 1123 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TAS2R42Q7RTR8 314 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 AQP12AQ8IXF9 295 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PHC2Q8IXK0 858 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OR10A6Q8NH74 314 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PROKR1Q8TCW9 393 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ACDQ96AP0 544 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF689Q96CS4 500 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FEM1CQ96JP0 617 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NSMCE2Q96MF7 247 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RHNO1Q9BSD3 238 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TRIM15Q9C019 465 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 IKZF5Q9H5V7 419 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 XKR8Q9H6D3 395 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC52A3Q9NQ40 469 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FAIMQ9NVQ4 179 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RBMX2Q9Y388 322 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NAALAD2Q9Y3Q0 740 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BACE2Q9Y5Z0 518 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FAM92AA1XBS5 289 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CCL16O15467 120 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ABLIM3O94929 683 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DIRAS1O95057 198 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PAPSS2O95340 614 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SERPINF2P08697 491 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HSD17B1P14061 328 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 M6PRP20645 277 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TGFBR1P36897 503 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HMGCS1Q01581 520 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NFATC3Q12968 1075 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 COL9A2Q14055 689 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NR6A1Q15406 480 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 C5orf22Q49AR2 442 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ATXN7L2Q5T6C5 722 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MRNIPQ6NTE8 343 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LETMD1Q6P1Q0 360 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TXNDC11Q6PKC3 985 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 Q6ZNX1 250 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TPGS1Q6ZTW0 290 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GPR156Q8NFN8 814 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SPPL3Q8TCT6 385 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FUBP1Q96AE4 644 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TOR3AQ9H497 397 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 POLE4Q9NR33 117 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TBC1D29Q9UFV1 150 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 COQ6Q9Y2Z9 468 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 INSL5Q9Y5Q6 135 aa11.25□□□□□ -0.61
CDK5RAP3-231ENST00000584063 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HIDE1A8MVS5 230 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 K7ERQ8 282 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 INSIG1O15503 277 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PROM1O43490 865 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC25A17O43808 307 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CIDEAO60543 219 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ALPIP09923 528 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF140P52738 457 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ERVPABLB-1P60509 514 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LGALS3BPQ08380 585 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 DGCR6Q14129 220 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MAPK11Q15759 364 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ATP6AP1LQ52LC2 224 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RFTN2Q52LD8 501 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CTSL3PQ5NE16 218 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 C6orf136Q5SQH8 315 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GLRX5Q86SX6 157 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ANKRD46Q86W74 232 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CMIPQ8IY22 773 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ITFG1Q8TB96 612 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 METTL6Q8TCB7 284 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ADAMTS16Q8TE57 1224 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 C2orf15Q8WU43 125 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RAB7BQ96AH8 199 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LINGO1Q96FE5 620 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CRELD1Q96HD1 420 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BIRC8Q96P09 236 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF334Q9HCZ1 680 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNHIT2Q9UHR6 403 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MICAL3Q7RTP6 2002 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GRXCR1A8MXD5 290 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 H0YJX3 145 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PER2O15055 1255 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KLF4O43474 513 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 BNIP3LO60238 219 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RFPL2O75678 378 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CDC123O75794 336 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 STC2O76061 302 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LRG1P02750 347 aa11.24□□□□□ -0.61
CDK5RAP3-231ENST00000584063 MC4RP32245 332 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms