RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MYH7BA7E2Y1 1941 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 ASTN1O14525 1302 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 UBE4BO95155 1302 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 H7C0S8 307 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 MEIS2O14770 477 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 RASGRF2O14827 1237 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PCDH7O60245 1069 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 GUCY1B2O75343 617 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 MLYCDO95822 493 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 IGHV4-39P01824 125 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 NR3C1P04150 777 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CLEC3BP05452 202 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CSH1P0DML2 217 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CSH2P0DML3 217 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CCNB1P14635 433 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PSMA4P25789 261 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 IVDP26440 423 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 COILP38432 576 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 GPD2P43304 727 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 RPL21P46778 160 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 HARS2P49590 506 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CASP4P49662 377 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PLTPP55058 493 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 NCALDP61601 193 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SNRPFP62306 86 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PSMC6P62333 389 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 GNB1P62873 340 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 IRX1P78414 480 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CREB5Q02930 508 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 NAE1Q13564 534 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 DRAP1Q14919 205 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SIX1Q15475 284 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 LPAL2Q16609 132 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 ZNF766Q5HY98 468 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 WDR38Q5JTN6 314 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 GPR139Q6DWJ6 353 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 OR7E24Q6IFN5 339 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 RGS9BPQ6ZS82 235 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 C1orf186Q6ZWK4 172 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 ZNF720Q7Z2F6 126 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PXKQ7Z7A4 578 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CEP57Q86XR8 500 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 GALNT13Q8IUC8 556 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 NELFCDQ8IXH7 590 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 C12orf56Q8IXR9 622 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 TTC39CQ8N584 583 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 UBL4BQ8N7F7 174 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 STPG4Q8N801 248 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 FBXO25Q8TCJ0 367 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 AGAP11Q8TF27 550 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SLC38A5Q8WUX1 472 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 MAIP1Q8WWC4 291 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CTNNBL1Q8WYA6 563 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 RHBDF1Q96CC6 855 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 ORAI1Q96D31 301 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PABPC5Q96DU9 382 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 FAM120BQ96EK7 910 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 LINGO1Q96FE5 620 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 GRAMD2BQ96HH9 432 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 IFT74Q96LB3 600 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 MAGEB18Q96M61 343 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PRMT1Q99873 361 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 HSD17B14Q9BPX1 270 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 ADPGKQ9BRR6 497 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 TRIM6Q9C030 488 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SLC25A18Q9H1K4 315 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 DPH5Q9H2P9 285 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 TUFT1Q9NNX1 390 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SLC52A3Q9NQ40 469 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 BEX4Q9NWD9 120 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 TAS2R10Q9NYW0 307 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 KCND2Q9NZV8 630 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 TBC1D7Q9P0N9 293 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 NYAP2Q9P242 653 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 BAIAP2L1Q9UHR4 511 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 LGALS13Q9UHV8 139 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 MTUS1Q9ULD2 1270 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 CORO1CQ9ULV4 474 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 C15orf41Q9Y2V0 281 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 SNX24Q9Y343 169 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 PIAS3Q9Y6X2 628 aa3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 MYH14Q7Z406 1995 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-208ENST00000583344 EP400Q96L91 3159 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 IGLV5-45A0A087WSX0 123 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 PTGES3LE9PB15 166 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TRAFD1O14545 582 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TNPO2O14787 897 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 VILLO15195 856 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TBCAO75347 108 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 BBOX1O75936 387 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 SLITRK3O94933 977 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 CCNDBP1O95273 360 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TTC4O95801 387 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 F9P00740 461 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 VIMP08670 466 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 CLTAP09496 248 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 LAMP2P13473 410 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms